PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112041.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 183aa    MW: 20166 Da    PI: 5.8258
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-053557123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C++ F++   L  H++ H
  XP_028112041.1 35 YECTYCKRGFTNAQALGGHMNIH 57
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDSTKHGSSE ISSEENDQQE IEKVNDDSTG TGRSYECTYC KRGFTNAQAL GGHMNIHRKD  60
KAKAKKLTES SSVSNNSNED HYMACNKYFA PVSSEHQAQY YAGLGAQVNH HQMYLPVPNP  120
SFPYGYYPGL MNTDSEFSSQ QGANLSLGIG PPLVEENEEK KKDGKGNGKG NEVDLELRLG  180
HNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.11e-14C2H2 family protein