PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 432aa MW: 48930.6 Da PI: 5.8033 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 311.6 | 1.7e-95 | 60 | 431 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +lL ecA+a+s++d +++++lL+ l+elasp+gd q+la+yf++AL + ++s+ +++k+l++ ++++++ +++ + f+evsP+ +f+h++ XP_028111700.1 60 RLLRECARAISDKDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGLRCFKTLTSVAEKNHSFDSARKLILKFQEVSPWTTFGHVA 154 7899**********************************************************9999885554444444445************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191 N aIlea+ege+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ +s + ++e+++r++kfA+ +gvpfefnv+ ++l +l+ XP_028111700.1 155 SNGAILEALEGESKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVT-TSIVSSVMKEIAQRMEKFARLMGVPFEFNVItGLNHLGELTK 248 ****************************************************.667999************************944569****** PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284 e L v+++Ea+aVn++ +l r+ +er +v+++++sl+P+vv+vve+ead ++++F++ f e+l++y+ f++le+++ ++s+er + XP_028111700.1 249 EGLGVQEDEAIAVNCIGALRRVE------VDERGSVIRMLQSLRPRVVTVVEEEADFssSRNDFVKCFEECLRFYTLYFEMLEESFVPTSNERLM 337 *********************97......445889*******************999545569******************************** PP GRAS 285 vErellgreivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSa 372 +Ere +r+iv v+ac ++ er+e+ +W+ rl+ea F+p+++s+++++++k+ll+++k g+ + ++ l+l+Wk++p+v++Sa XP_028111700.1 338 LERE-CSRSIVRVLACDDENgvlgDCERKERGCQWSLRLKEA-FSPASFSDDVVDDVKALLKRYK-TGWALVlpqGDDSGLYLTWKEEPVVWASA 429 ****.89**********998544457**************98.**********************.5555554446688888************* PP GRAS 373 Wr 374 W+ XP_028111700.1 430 WK 431 *8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 432 aa Download sequence |
MERTLFTPRE THFSFSSNHH IIHGHPNMQS TNNQPQTSHT STSRSSDFGE PNTDGKWASR 60 LLRECARAIS DKDSTKIHHL LWMLNELASP YGDCDQKLAS YFLQALFCKA TESGLRCFKT 120 LTSVAEKNHS FDSARKLILK FQEVSPWTTF GHVASNGAIL EALEGESKLH IIDISNTLCT 180 QWPTLLEALA TRNDETPRLK LTVVVTTSIV SSVMKEIAQR MEKFARLMGV PFEFNVITGL 240 NHLGELTKEG LGVQEDEAIA VNCIGALRRV EVDERGSVIR MLQSLRPRVV TVVEEEADFS 300 SSRNDFVKCF EECLRFYTLY FEMLEESFVP TSNERLMLER ECSRSIVRVL ACDDENGVLG 360 DCERKERGCQ WSLRLKEAFS PASFSDDVVD DVKALLKRYK TGWALVLPQG DDSGLYLTWK 420 EEPVVWASAW KP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-134 | GRAS family protein |