PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111700.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 432aa    MW: 48930.6 Da    PI: 5.8033
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS311.61.7e-95604313374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+ +++k+l++ ++++++ +++ +    f+evsP+ +f+h++
  XP_028111700.1  60 RLLRECARAISDKDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGLRCFKTLTSVAEKNHSFDSARKLILKFQEVSPWTTFGHVA 154
                     7899**********************************************************9999885554444444445************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                      N aIlea+ege+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+  +s  +  ++e+++r++kfA+ +gvpfefnv+   ++l +l+ 
  XP_028111700.1 155 SNGAILEALEGESKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVT-TSIVSSVMKEIAQRMEKFARLMGVPFEFNVItGLNHLGELTK 248
                     ****************************************************.667999************************944569****** PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                     e L v+++Ea+aVn++ +l r+        +er +v+++++sl+P+vv+vve+ead   ++++F++ f e+l++y+  f++le+++ ++s+er +
  XP_028111700.1 249 EGLGVQEDEAIAVNCIGALRRVE------VDERGSVIRMLQSLRPRVVTVVEEEADFssSRNDFVKCFEECLRFYTLYFEMLEESFVPTSNERLM 337
                     *********************97......445889*******************999545569******************************** PP

            GRAS 285 vErellgreivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSa 372
                     +Ere  +r+iv v+ac  ++      er+e+  +W+ rl+ea F+p+++s+++++++k+ll+++k  g+ +     ++  l+l+Wk++p+v++Sa
  XP_028111700.1 338 LERE-CSRSIVRVLACDDENgvlgDCERKERGCQWSLRLKEA-FSPASFSDDVVDDVKALLKRYK-TGWALVlpqGDDSGLYLTWKEEPVVWASA 429
                     ****.89**********998544457**************98.**********************.5555554446688888************* PP

            GRAS 373 Wr 374
                     W+
  XP_028111700.1 430 WK 431
                     *8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MERTLFTPRE THFSFSSNHH IIHGHPNMQS TNNQPQTSHT STSRSSDFGE PNTDGKWASR  60
LLRECARAIS DKDSTKIHHL LWMLNELASP YGDCDQKLAS YFLQALFCKA TESGLRCFKT  120
LTSVAEKNHS FDSARKLILK FQEVSPWTTF GHVASNGAIL EALEGESKLH IIDISNTLCT  180
QWPTLLEALA TRNDETPRLK LTVVVTTSIV SSVMKEIAQR MEKFARLMGV PFEFNVITGL  240
NHLGELTKEG LGVQEDEAIA VNCIGALRRV EVDERGSVIR MLQSLRPRVV TVVEEEADFS  300
SSRNDFVKCF EECLRFYTLY FEMLEESFVP TSNERLMLER ECSRSIVRVL ACDDENGVLG  360
DCERKERGCQ WSLRLKEAFS PASFSDDVVD DVKALLKRYK TGWALVLPQG DDSGLYLTWK  420
EEPVVWASAW KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-134GRAS family protein