PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110647.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 594aa    MW: 65114.2 Da    PI: 5.0874
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS463.11.6e-1412245921374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++ +la+al++++  la +++ +m+++a+yf+eALa+r++r        l p++ +++  s++   +  f+e++P+lkf+h
  XP_028110647.1 224 LVHTLMACAEAVQQDNVKLAEALVKQIGFLAVSQAGTMRKVATYFAEALARRIYR--------LYPQNPQDSAFSDH--LQIHFYETCPYLKFAH 308
                     689****************************************************........44555554445555..4456************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++++++ l+e+g++La++Ae+++v+fef+ +va++l+dl+
  XP_028110647.1 309 FTANQAILEAFATKKRVHVIDFSMKQGMQWPALMQALALRPGGPPTFRLTGIGPPSHDNTDHLQEVGWKLAQLAETIHVEFEFRGFVANSLADLD 403
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........lpr 277
                      ++L++++gEa+aVn+v++ h+ll++++++e+    vL++vk+++P++++vveqea+hn++ Fl+rf+e+l+yys+lfdsle           p+
  XP_028110647.1 404 ASMLDLREGEAVAVNSVFEFHQLLARPGAIEK----VLSAVKEMKPEILTVVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCggggggspSPA 494
                     ********************************....*********************************************98889999988888 PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      +++++++++++lgr+i+nvvaceg++r+erhetl++Wr+r+++aGF++v+l+++a kqa++ll+ ++ +dgyrvee+ g+l+lgW++rpL+++S
  XP_028110647.1 495 VNNQDKVMSEVYLGRQICNVVACEGSDRVERHETLAQWRARFGSAGFESVHLGSNAFKQASMLLALFNgGDGYRVEENGGCLMLGWQTRPLIATS 589
                     88********************************************************************************************* PP

            GRAS 372 aWr 374
                     aW+
  XP_028110647.1 590 AWK 592
                     **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MKREHHQHYP PPPHQDTFCG GGDDGVGSSS GGGGSGKPKT WEEDAGVDEL LAVLGYKVKA  60
SDMADVAQKL EQLEEVMGHA QEDGLSHLAF DTVHYNPSDL SSWLESMITE LNPLPEFPPP  120
VDDPFLAAIE SSSTVTSVDT QNQYNQQNSY GRIFQDSSSD YDLKAIPGKA VYSQIQPPNK  180
RFKPSSPSSS SSVTSSMPLG MWAESIEPTR PMVLVDSQEN GIRLVHTLMA CAEAVQQDNV  240
KLAEALVKQI GFLAVSQAGT MRKVATYFAE ALARRIYRLY PQNPQDSAFS DHLQIHFYET  300
CPYLKFAHFT ANQAILEAFA TKKRVHVIDF SMKQGMQWPA LMQALALRPG GPPTFRLTGI  360
GPPSHDNTDH LQEVGWKLAQ LAETIHVEFE FRGFVANSLA DLDASMLDLR EGEAVAVNSV  420
FEFHQLLARP GAIEKVLSAV KEMKPEILTV VEQEANHNGP VFLDRFTESL HYYSTLFDSL  480
EGCGGGGGGS PSPAVNNQDK VMSEVYLGRQ ICNVVACEGS DRVERHETLA QWRARFGSAG  540
FESVHLGSNA FKQASMLLAL FNGGDGYRVE ENGGCLMLGW QTRPLIATSA WKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein