PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 123aa MW: 13882.8 Da PI: 5.7949 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 65.2 | 1.7e-20 | 44 | 113 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 +fYn+Y +vGFs+rk++ +ks ++geit+rtfvCskeg r+++k++ r +raetrtgC a + +k+ + XP_028110325.1 44 EFYNSYVGRVGFSIRKEYAHKS-KTGEITSRTFVCSKEGLRKSDKRD-FAVRIPRAETRTGCGALMSIKLIR 113 6******************999.7888*****************999.9999****************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MEVLDISKMD DLTIATQMDV HGEDDTECKS ILGMEFDSEQ SAYEFYNSYV GRVGFSIRKE 60 YAHKSKTGEI TSRTFVCSKE GLRKSDKRDF AVRIPRAETR TGCGALMSIK LIRQIGSIEL 120 SIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-17 | FAR1 family protein |