PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110197.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 267aa    MW: 29978.8 Da    PI: 6.6714
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.24.6e-18169203135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  XP_028110197.1 169 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 203
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDGYGLSAPE CFPIDDLLDF SNDDLFSAST TTDNHHHLTS SNNTSISGGG GNAPNLNQST  60
DFTDDLCVPS DVVAELEWLS DFVDDSLWFS NNFVDESFAG TVNLSPETSF HGRSRSKRSR  120
ASSINKRWPS SPESETPMIA ESKAFIKKRE SSSSSSSSES SQAEVARRCT HCASEKTPQW  180
RTGPLGPKTL CNACGVRFKS GRLVPEYRPA ASPTFVLTQH SNSHRKVMEL RRQKEMLRRG  240
QQEEEQQHHH HHHQQQLFRH QHNFEVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113118RSRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.16e-59GATA family protein