PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109415.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 199aa    MW: 22457.5 Da    PI: 10.1077
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.1e-32120178159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+++C+vkk+++r ++d+ +v++tYeg Hnh+
  XP_028109415.1 120 LDDGYRWRKYGQKSVKNNTHPRSYYRCTHHTCNVKKQIQRLSKDTGIVVTTYEGIHNHP 178
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDQKQALQGP QPPPPPPNNN PSYLFTPLLS PTSLHHPPPL LHPNPTPQPP HLLHDIDWVS  60
LLSGGLGDMR PILESASSIA STSQSVGNEG IKEDRRRGSR GKKAARPRFA FQTRSEDDIL  120
DDGYRWRKYG QKSVKNNTHP RSYYRCTHHT CNVKKQIQRL SKDTGIVVTT YEGIHNHPCA  180
KLMETLSPLL KQMQFLSQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.15e-56WRKY family protein