PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028108965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 24216.3 Da PI: 8.2196 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.1e-18 | 96 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIr p + k r++lg++ t+e+Aa a+++a+ k++g XP_028108965.1 96 KYRGVRRRP-WGKFAAEIRNP---KrKGVRIWLGTYETPEDAALAYDRAAFKMRG 146 8********.**********8...4334*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MFEQTISDSD FALLESIRRH LLDESDVSEN FPVMHPCNAP PVYDLSSSFT AFSFIENCQV 60 MPLNINRSTE TMIGFGVKEE EAVGAREDHV PPEWRKYRGV RRRPWGKFAA EIRNPKRKGV 120 RIWLGTYETP EDAALAYDRA AFKMRGSGAK LNFPHLIGSD NSELVRVTPR QRKSPETLAP 180 YSSSESDSPK RRKSQVGSVL AVKPELESVS VRNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-44 | ERF family protein |