PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108220.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 299aa    MW: 34019 Da    PI: 6.7158
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1171.1e-36261162101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y+++ed++++++isw+e+g++f+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k   ++         weF+++ F++g+k+ll++
  XP_028108220.1  26 FLTKTYQLVEDNSIDDVISWNEDGSTFIVWNPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKAVPDR---------WEFSNECFRRGEKRLLCD 111
                     9***************************************************************9999.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_028108220.1 112 IQRRK 116
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MVPPPGEQNG GESTASDAPR SLPTPFLTKT YQLVEDNSID DVISWNEDGS TFIVWNPAEF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKAV PDRWEFSNEC FRRGEKRLLC DIQRRKIATA  120
PGMGSPSNSG EEQVISSNSS PAKAPILILC RDRETSSAEL IDENDRLRKE NMQLNRELSQ  180
MKNLCNNIHS LMSNYANNRP ESGSHSVKPL HLLPMIRFTG GVNNQSKPED ETSPRLFGVP  240
IGMKRSRREG ESEAHHELPL QLGWTELKSE PLDHRDGGED QETTPWLRQC HRTNQRVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-104HSF family protein