PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108058.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 332aa    MW: 36966.9 Da    PI: 6.9011
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.51e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv ++++ G+g+W++++   g+ R+ k+c++rw +yl
   XP_028108058.1 14 KGPWTPEEDIFLVSYIQENGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP

2Myb_DNA-binding43.57.3e-1467117148
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ ++++ ++lG+     +W++Ia++++  Rt++++k++w+++l
   XP_028108058.1  67 RGNFTDHEEKMIIHLQALLGNSlswfRWAAIASYLP-QRTDNDIKNYWNTHL 117
                      89*******************9**************.************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGRPPCCDKT GVKKGPWTPE EDIFLVSYIQ ENGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDHEEKMIIH LQALLGNSLS WFRWAAIASY LPQRTDNDIK NYWNTHLKKK  120
LKKLNGHEHG HSQDGFSASQ SSSVSKGQWE RRLQTDIHMA KKALCDALSI DKSTNLNDLK  180
PYPNGYSHPR STSPPAAQSS STTYASSTEN IARLLQNWMK GSPKSSQTSS ETTTQNSNNP  240
SEGTLSATTP EGFDSLFSFH SSNSDASQSV TVDETATNFT HETCLFQDES KPSLENQVPL  300
SLLEKWLFDD GAAAQGHGDL LDMSLGENDE FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.14e-96MYB family protein