PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028108058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 36966.9 Da PI: 6.9011 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv ++++ G+g+W++++ g+ R+ k+c++rw +yl XP_028108058.1 14 KGPWTPEEDIFLVSYIQENGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 43.5 | 7.3e-14 | 67 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG+ +W++Ia++++ Rt++++k++w+++l XP_028108058.1 67 RGNFTDHEEKMIIHLQALLGNSlswfRWAAIASYLP-QRTDNDIKNYWNTHL 117 89*******************9**************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MGRPPCCDKT GVKKGPWTPE EDIFLVSYIQ ENGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TDHEEKMIIH LQALLGNSLS WFRWAAIASY LPQRTDNDIK NYWNTHLKKK 120 LKKLNGHEHG HSQDGFSASQ SSSVSKGQWE RRLQTDIHMA KKALCDALSI DKSTNLNDLK 180 PYPNGYSHPR STSPPAAQSS STTYASSTEN IARLLQNWMK GSPKSSQTSS ETTTQNSNNP 240 SEGTLSATTP EGFDSLFSFH SSNSDASQSV TVDETATNFT HETCLFQDES KPSLENQVPL 300 SLLEKWLFDD GAAAQGHGDL LDMSLGENDE FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 4e-96 | MYB family protein |