PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107745.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 488aa    MW: 55270.2 Da    PI: 6.2688
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.16.4e-1031154863374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + Lle A+a+++++  ++q+l++ l+el sp+gd+ q+la yf++AL +r+++s++++ ++l + ++++ + +++ + +  f+evsP+ +f+h++
  XP_028107745.1 115 DILLETARAIANKNSVRVQQLMWMLNELGSPYGDTDQKLAYYFLQALFSRMTDSGEKCHRTLISASEKTCSFDSTRKTVLKFQEVSPWTTFGHVA 209
                     679*********************************************************996666655555555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak.rledl 189
                     +N aI++a+ege+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v s   +   ++ ++e+g r++kfA+ +gvpf+fnv++++ +l++l
  XP_028107745.1 210 CNAAIMDAFEGETKLHIIDISNTYCTQWPTLLEALATRNDETPHLRLTTVLSGGGSaaVQKVMKEIGTRMEKFARLMGVPFKFNVVHHSgDLSEL 304
                     **************************************************99544477999*************************8888***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklprese 280
                     +l +L++k +EalaVn++ +l ++         +rd +++l++sl+P++++vve+ead++ +    +F+++f ++l+++ + ++sle ++p++s+
  XP_028107745.1 305 SLGQLNIKDDEALAVNCIGALRSVN--------RRDVLISLFRSLQPRIMTVVEEEADLDVGvdglDFVNGFQQCLRWFRVYLESLEDSFPKTSN 391
                     ********************99997........899********************8885444555***************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSa 372
                     e+  +Er+  gr++v++vac+ +e++er+et+++W++rl+  GF+pv ls+++ +++++llr++k +g+ +    +e + ++l W+d+p+v++Sa
  XP_028107745.1 392 EKLILERV-AGRAVVDLVACRAEESIERRETAARWSRRLHGGGFRPVLLSDEVCDDVRALLRRYK-EGWAMTqcsDEIAGMFLVWRDQPVVWASA 484
                     *******9.********************************************************.6655442325567888************* PP

            GRAS 373 Wr 374
                     Wr
  XP_028107745.1 485 WR 486
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MDTLFRLVSL QSDQSFNSSR TSSSSRSSRQ QNHHHQEEEE CFNNFMDEDG FSSSSSKHYY  60
PYHHHQQLST TTTTTTPPPP HHHPFESADF SFSPARDLNL EFASSISGTN KWASDILLET  120
ARAIANKNSV RVQQLMWMLN ELGSPYGDTD QKLAYYFLQA LFSRMTDSGE KCHRTLISAS  180
EKTCSFDSTR KTVLKFQEVS PWTTFGHVAC NAAIMDAFEG ETKLHIIDIS NTYCTQWPTL  240
LEALATRNDE TPHLRLTTVL SGGGSAAVQK VMKEIGTRME KFARLMGVPF KFNVVHHSGD  300
LSELSLGQLN IKDDEALAVN CIGALRSVNR RDVLISLFRS LQPRIMTVVE EEADLDVGVD  360
GLDFVNGFQQ CLRWFRVYLE SLEDSFPKTS NEKLILERVA GRAVVDLVAC RAEESIERRE  420
TAARWSRRLH GGGFRPVLLS DEVCDDVRAL LRRYKEGWAM TQCSDEIAGM FLVWRDQPVV  480
WASAWRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein