PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HSF | ||||||||
Protein Properties | Length: 545aa MW: 60810.1 Da PI: 4.7165 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 106.4 | 2.3e-33 | 115 | 207 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++i++d++l+ +isw +g+sfvv+d+ efa+ vLp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF+++ F +gk++ll++ XP_028107676.1 115 FLSKTFDIVDDSTLNPIISWGLRGESFVVWDPLEFARLVLPRNFKHNNFSSFVRQLNTYGFRKIDTDR---------WEFANEGFLRGKRHLLKS 200 9****************************************************************999.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+ks+ XP_028107676.1 201 IQRRKST 207 ****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MNPNDQSLFP SSSPPGSDSD SPITPHTSGF STIQPSSCPL PMSFAGLSSS SSSSPFVPAV 60 LEFEPYRHMS EFKGIVIGEN VLNVPPIGTS SELEENLDTP PQPLEALQGT PIPPFLSKTF 120 DIVDDSTLNP IISWGLRGES FVVWDPLEFA RLVLPRNFKH NNFSSFVRQL NTYGFRKIDT 180 DRWEFANEGF LRGKRHLLKS IQRRKSTQMQ QIRSHAGSST ELEKGGLEGE LERLRKEKTS 240 MVQEVVELQH QHHGTVQDMN AVNEKLQAAE QRQKQMVTFL AKLFRNPEFL ARLQQKKEQR 300 AIDSPRTMRK FVKHQQHEPG QLKSSMEGQI IEYRPELWNL AASSITPDLS PAAANETPDF 360 LVQDREGNLG LGAETLPFQI GNIVSEELHV THEVLKTTEQ VGERTSSLRT EDPLFKGKNV 420 VYPQPELVPE YFVSFPEDLT KEKNVPESLS PGIESLVKKE DVWNIGFQAG AGMSNSSNVL 480 WDIVNNYDVP ELGISSGLSD IWDLDSLLVA GSSGAEKWPG DDSPFDEPDS QAGQTNDDIS 540 RKMDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 1e-93 | HSF family protein |