PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106614.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 280aa    MW: 31768.3 Da    PI: 7.2239
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.7e-055072123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_028106614.1 50 YTCSFCRREFKSAQALGGHMNVH 72
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MEQARYWMLS KPKHSLSSHL QACGDSWEEQ AFAEDAAGPL GGCIWPPRSY TCSFCRREFK  60
SAQALGGHMN VHRRDRARLK QSPSPLNENL HQHHHQNHHN HILNPCTSLD VQYPSQICTV  120
VYNPNPNSDH VVFASPPLAQ ENPNEKTFLP LFSSPILGDH HKKSSIFAPP SWSNLVADRY  180
FDVSDPNNEE RNRSKEAYFT SDLSVSLNLI VRRTRSSSSE SKEEEAVSCK RQRIDPTRLP  240
SFLKSNSTDT QHLKSEVLSS SSSIEDIDLE LRLGDRPEVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-27C2H2 family protein