PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028106505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 423aa MW: 45364.5 Da PI: 6.8042 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 201 | 250 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_028106505.1 201 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 250 7********.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence |
MCLTKVANPR DSGEYVRFPT TDTADDGGAD HPILSSAAVA RERSVMVTAL TNVVSGGQRL 60 GDGGGEWGYR AEMGGGGGGT SSFVGGSGGI YSANSPTSPY SSSSSGSWAG QKRGREEESV 120 TQYSSEQQLH RVYRGFISDF RGSHGGESSS VTTTAAEEPT NIVTATTPTT ITITATATAT 180 TPPTPTTEAA SNEEGGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA 240 YDEAALRFRG NRAKLNFPEN VRLLPPPQHP PATQLPISNS PATHLAAPPP PPPFFQTHHQ 300 FQPNIARDYW QYSQLLQSTG DLNFHALQLQ QQQQQQQQQQ NSLLDQMFYA SSLAGLDAQT 360 LVSSSPSFAS SSVTSATSSY PLFFSDQQQL GYFRPPGPQN QGGGSDFPAP PWTGSGQYPP 420 SSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 197 | 202 | ERRRRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 1e-15 | ERF family protein |