PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105342.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 338aa    MW: 37834.5 Da    PI: 9.5031
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.11.2e-1426109186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf....erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  ++ L+++++ +++  +r+klk+ +Wee++ ++++r +     ++p+qCk+k+e ++kry+ + + ++       s ++++ +++
  XP_028105342.1  26 EWSEGGIMSLLDVYETKWSLRNRAKLKGSDWEEIAGQVSARNCgtkpGKTPNQCKNKIEAMKKRYRMELAVNNH------SGWQFYARMD 109
                     5*************************************777775343579******************999996......4699999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MEGGGEKNKG VVVAVVKTPD KSKRDEWSEG GIMSLLDVYE TKWSLRNRAK LKGSDWEEIA  60
GQVSARNCGT KPGKTPNQCK NKIEAMKKRY RMELAVNNHS GWQFYARMDG LVKGTHCLEH  120
KVGDVVANGV TETEGLQALP NLVGDLETDT KRVDDNGPTH VQIVEKAQNY KTVDESGQNH  180
VQVVKKAQNC NTIVERGQNH VQDDNQDDAS DTVPNNSEFS TPRNKAARVA DRSLKVNSFK  240
RRKRSGNDMA ESIRVLAHSM LKIEQARMEM YRDSERLRVE ADIKRAEMDL KRTEIVAKTQ  300
LQIAKLLVKR TCNHNNKSGN SSLVGEHNVA TNPEERSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.18e-54Trihelix family protein