PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102380.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 881aa MW: 98914.5 Da PI: 5.9797

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53	1.2e-16	64	137	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY+eYA++vGFs+r+++ ++sk + ++t +f C + g ++ ++ C+a l++++++++kw+vtk+++eH+H+ XP_028102380.1 64 FYDEYARRVGFSTRVNQYSRSKSDATVTVLEFLCARDGLKRMAGDS--------------CDALLRIELKDQDKWVVTKFVKEHSHST 137 9*************************************998887..............************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 881 aa Download sequence
MNVEVIDVEE GNMGHHATAD DEDAEPNNGE AANAAGNSTA QDDDGGAEPH VGMEFDSEDV 60 AKTFYDEYAR RVGFSTRVNQ YSRSKSDATV TVLEFLCARD GLKRMAGDSC DALLRIELKD 120 QDKWVVTKFV KEHSHSTVSP SKVHYLRPRR HFAGAVKNMA ETYQGVGVVP SGVMYVSMDG 180 NRISAETNRG ARNAPPVESS SAVKNTGHLS YAARPASRKK TLGKDAQNLL DYFKKMQAEN 240 PGFYYAIQLD EDNRMANVFW ADARSRSAYG RFGDTVTLDT MYRVNQYRVP FAPFTGVNHH 300 GQMVLFGCAL LLDESEATFV WLFRTFLAAM NDQAPVSIIT DQDKAIQAAV AQVFPEIRHC 360 FNKWDVLREG QEKLAHVCHV YPNFQVELYN CINLTETIEE FESSWDSILN KYDLRRNDWL 420 QSLYNARAQW VPVFFRDTFF AAISPSQGLQ CSFFDGYVNQ QTTLPMFFRQ YERALENSFE 480 KEIEADFDTI CTAPVLRTPS PMEKQAANLY TRKIFAKFQD ELVETFVYTA NKIEGDGAIS 540 TFRVAKFEDD NKAYIVTLNG PEMRASCSCQ MFEYLGILCR HILTVFTVTN VLTLPSHYIL 600 KRWTTNAKSG AGFDERFELQ GQESLTLRYN NLCREAIKYA EEGAIAPETF NVAMVALGEG 660 GKKVAAMKKN VAKVAPPSSH TSGVGYDDKR TSNLAPDMPP LLWPRQDEIT RRFNLNDASV 720 PAQPVADLNL PRMAPVSLHR DDGHPDNMAV LPCLKSMTWV MENKNSTPAN RVAVINLKLQ 780 DYSRATSGES EVKFQLSKVT LEPMLKSMSY ISEQLSTPAN RVAVINLKLQ DTETTSGESD 840 VKFQVSRDTL GAMLRSMAYI REQLSIAAES QSETPSKKQR K

Sequence ? help Back to Top

Protein Sequence Length: 881 aa Download sequence

MNVEVIDVEE GNMGHHATAD DEDAEPNNGE AANAAGNSTA QDDDGGAEPH VGMEFDSEDV  60
AKTFYDEYAR RVGFSTRVNQ YSRSKSDATV TVLEFLCARD GLKRMAGDSC DALLRIELKD  120
QDKWVVTKFV KEHSHSTVSP SKVHYLRPRR HFAGAVKNMA ETYQGVGVVP SGVMYVSMDG  180
NRISAETNRG ARNAPPVESS SAVKNTGHLS YAARPASRKK TLGKDAQNLL DYFKKMQAEN  240
PGFYYAIQLD EDNRMANVFW ADARSRSAYG RFGDTVTLDT MYRVNQYRVP FAPFTGVNHH  300
GQMVLFGCAL LLDESEATFV WLFRTFLAAM NDQAPVSIIT DQDKAIQAAV AQVFPEIRHC  360
FNKWDVLREG QEKLAHVCHV YPNFQVELYN CINLTETIEE FESSWDSILN KYDLRRNDWL  420
QSLYNARAQW VPVFFRDTFF AAISPSQGLQ CSFFDGYVNQ QTTLPMFFRQ YERALENSFE  480
KEIEADFDTI CTAPVLRTPS PMEKQAANLY TRKIFAKFQD ELVETFVYTA NKIEGDGAIS  540
TFRVAKFEDD NKAYIVTLNG PEMRASCSCQ MFEYLGILCR HILTVFTVTN VLTLPSHYIL  600
KRWTTNAKSG AGFDERFELQ GQESLTLRYN NLCREAIKYA EEGAIAPETF NVAMVALGEG  660
GKKVAAMKKN VAKVAPPSSH TSGVGYDDKR TSNLAPDMPP LLWPRQDEIT RRFNLNDASV  720
PAQPVADLNL PRMAPVSLHR DDGHPDNMAV LPCLKSMTWV MENKNSTPAN RVAVINLKLQ  780
DYSRATSGES EVKFQLSKVT LEPMLKSMSY ISEQLSTPAN RVAVINLKLQ DTETTSGESD  840
VKFQVSRDTL GAMLRSMAYI REQLSIAAES QSETPSKKQR K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein