PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102350.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 493aa MW: 55722.5 Da PI: 6.2264

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.2e-07	437	490	2	47
SSS-HHHHHHHHHHHHHT.....TTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkql.....GggtWktIartmg...kgRtlkqcksrwqky 47 ++W+t E++ l +v+++ G+g+Wk+I + Rt+ ++k++w++ XP_028102350.1 437 KKWSTLEEDTLRTGVQKYvillyGMGNWKLILDSYRdifEQRTEVDLKDKWRNM 490 68***********98533333888*********9**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MDIDVARWVL DFILRQSVDD RLLNALIRVL PLPNDNSSLK KAMLLRRIES EIAKCLVSEK 60 ILELLERIEE LDCEEGVEAS KAMKGAYCAV AVDCVVRFLD ESEDKEAKYF DAVKRIWRGR 120 VWKMERSEKA VGLVSDELRS WKDEIEAVVW DASVCENVQM RNRRNDALEA VRTYVAEVWE 180 IMGPSFLDLV AETVSDDTMK EVLGLGNNQV CNGVGEIAAC MPDSSHDLIA GKGNNEMQRG 240 IALPRRKHVA VKRGRVSSGT SRGVKIADSD DLDIGKSSNN YGCLPTPEIN KVQEALRTSR 300 LDLRAAVKDP LPDALQVAEN VISSMRREDM NQEPSVEGQK VDVEISIHSV DRSAEAAQAN 360 EANLGNQCSR HQNNVPKPSL MARNSTAHTC EWDDSIDSLS EGSPGRGSIH LPTPKRRLVS 420 PLKKYEIKKI GMRRKHKKWS TLEEDTLRTG VQKYVILLYG MGNWKLILDS YRDIFEQRTE 480 VDLKDKWRNM IRY

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MDIDVARWVL DFILRQSVDD RLLNALIRVL PLPNDNSSLK KAMLLRRIES EIAKCLVSEK  60
ILELLERIEE LDCEEGVEAS KAMKGAYCAV AVDCVVRFLD ESEDKEAKYF DAVKRIWRGR  120
VWKMERSEKA VGLVSDELRS WKDEIEAVVW DASVCENVQM RNRRNDALEA VRTYVAEVWE  180
IMGPSFLDLV AETVSDDTMK EVLGLGNNQV CNGVGEIAAC MPDSSHDLIA GKGNNEMQRG  240
IALPRRKHVA VKRGRVSSGT SRGVKIADSD DLDIGKSSNN YGCLPTPEIN KVQEALRTSR  300
LDLRAAVKDP LPDALQVAEN VISSMRREDM NQEPSVEGQK VDVEISIHSV DRSAEAAQAN  360
EANLGNQCSR HQNNVPKPSL MARNSTAHTC EWDDSIDSLS EGSPGRGSIH LPTPKRRLVS  420
PLKKYEIKKI GMRRKHKKWS TLEEDTLRTG VQKYVILLYG MGNWKLILDS YRDIFEQRTE  480
VDLKDKWRNM IRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	4e-20	MYB_related family protein