PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102044.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 488aa MW: 54068.4 Da PI: 5.4601

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.1	4e-33	259	313	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lm+v+ Lt++hvkSHLQkYR+ XP_028102044.1 259 KTRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMNVETLTIYHVKSHLQKYRT 313 68****************************************************8 PP
2	Myb_DNA-binding	56.3	7.4e-18	261	312	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +++t +++ks++qky+ XP_028102044.1 261 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMNvETLTIYHVKSHLQKYR 312 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDVRPALFIR RSSEKQLTNM GFSGAISSSF PVFPTPLEEN YPKFTDSFQV SSERELMMNS 60 ISPQPTPLDS NSGTVGNLFS SASGFSTDVH FSSVSPQARC FHNSPFISQS SSDGASLPPI 120 HSSHSGLHST QLINYPEGNN DMSWTTDLLQ DFLDFPENIP VQNGQVETIT GVMASQEHVK 180 RTDWQEWAHQ SISVDDALDL DSNWSDIPDD ISAPDPKPKV IEPPTDVFAH QPQVHLHHPI 240 PSGEICPVAS PLSLATQNKT RMRWTPELHE AFVEAVNKLG GSERATPKGV LKLMNVETLT 300 IYHVKSHLQK YRTARYKPES SEGMSERNLT PIEEITSLDL KASMGITEAL RVQMEVQKQL 360 HEQLEIQRKL QLRIEEQGRN LQMMFEKQKK MEDVRMKASS SNPNVPSPLP STVQQPSLAD 420 ENLEASKQDK IVRTTGSGEM SASTAREEIS QDSSEKQTPD PVTRGSSPRP LKRARGDETA 480 ASSAKLAS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDVRPALFIR RSSEKQLTNM GFSGAISSSF PVFPTPLEEN YPKFTDSFQV SSERELMMNS  60
ISPQPTPLDS NSGTVGNLFS SASGFSTDVH FSSVSPQARC FHNSPFISQS SSDGASLPPI  120
HSSHSGLHST QLINYPEGNN DMSWTTDLLQ DFLDFPENIP VQNGQVETIT GVMASQEHVK  180
RTDWQEWAHQ SISVDDALDL DSNWSDIPDD ISAPDPKPKV IEPPTDVFAH QPQVHLHHPI  240
PSGEICPVAS PLSLATQNKT RMRWTPELHE AFVEAVNKLG GSERATPKGV LKLMNVETLT  300
IYHVKSHLQK YRTARYKPES SEGMSERNLT PIEEITSLDL KASMGITEAL RVQMEVQKQL  360
HEQLEIQRKL QLRIEEQGRN LQMMFEKQKK MEDVRMKASS SNPNVPSPLP STVQQPSLAD  420
ENLEASKQDK IVRTTGSGEM SASTAREEIS QDSSEKQTPD PVTRGSSPRP LKRARGDETA  480
ASSAKLAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.1	4e-96	G2-like family protein