PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028102023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 582aa MW: 66578.3 Da PI: 7.9424 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.3 | 7.9e-15 | 47 | 136 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +p+ + ++ l +p f+++ +g + + l++ +g+ W v + +k +++ +++GW +Fv++n +++g f+vF +dg+ f +k XP_028102023.1 47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134 88999999988875.********777655..5668***************..*******************************9998766..555 PP EE CS B3 96 vf 97 +f XP_028102023.1 135 LF 136 55 PP | |||||||
2 | B3 | 43.1 | 7.8e-14 | 464 | 541 | 10 | 89 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++++ l++p + +++h++k + l+l de+gr+W+ ++ ++ gr++lt GWk F+k n+Lk D ++ ++++ + XP_028102023.1 464 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 541 4566779**********998..6668***************77776.5789*********************999876344 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 582 aa Download sequence |
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER 60 LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF 120 LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED 180 ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE 240 DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE 300 DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCYGNKG KATIKDKGGN 360 KRAYTMEVEE EEEEETDDDD DEEDELEAKI LRKKTEKEKS EKSAKGLEKI SQGTSYGNKG 420 KDTIKGEGGN KRADTIAVED DEDVFKYGMV SWPKNPCFVA KLRSTRRTEL YVPMDVIRDH 480 NLKLPSNLIL LDEEGRKWST RVVQWNDGRT WLTVGWKAFC KWNNLKWEDR CICEFIRGKG 540 RRGIFIKTCI LRAGSWLPKK DSILSSDHQD QVDKRHFQGS PK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 203 | 208 | LKKIKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-14 | B3 family protein |