PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102023.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 582aa MW: 66578.3 Da PI: 7.9424

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.3	7.9e-15	47	136	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +p+ + ++ l +p f+++ +g + + l++ +g+ W v + +k +++ +++GW +Fv++n +++g f+vF +dg+ f +k XP_028102023.1 47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134 88999999988875.******777655..5668***********..*****************************9998766..555 PP EE CS B3 96 vf 97 +f XP_028102023.1 135 LF 136 55 PP
2	B3	43.1	7.8e-14	464	541	10	89
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++++ l++p + +++h++k + l+l de+gr+W+ ++ ++ gr++lt GWk F+k n+Lk D ++ ++++ + XP_028102023.1 464 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 541 4566779********998..6668***********77776.5789*******************999876344 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER 60 LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF 120 LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED 180 ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE 240 DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE 300 DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCYGNKG KATIKDKGGN 360 KRAYTMEVEE EEEEETDDDD DEEDELEAKI LRKKTEKEKS EKSAKGLEKI SQGTSYGNKG 420 KDTIKGEGGN KRADTIAVED DEDVFKYGMV SWPKNPCFVA KLRSTRRTEL YVPMDVIRDH 480 NLKLPSNLIL LDEEGRKWST RVVQWNDGRT WLTVGWKAFC KWNNLKWEDR CICEFIRGKG 540 RRGIFIKTCI LRAGSWLPKK DSILSSDHQD QVDKRHFQGS PK

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER  60
LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF  120
LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED  180
ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE  240
DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE  300
DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCYGNKG KATIKDKGGN  360
KRAYTMEVEE EEEEETDDDD DEEDELEAKI LRKKTEKEKS EKSAKGLEKI SQGTSYGNKG  420
KDTIKGEGGN KRADTIAVED DEDVFKYGMV SWPKNPCFVA KLRSTRRTEL YVPMDVIRDH  480
NLKLPSNLIL LDEEGRKWST RVVQWNDGRT WLTVGWKAFC KWNNLKWEDR CICEFIRGKG  540
RRGIFIKTCI LRAGSWLPKK DSILSSDHQD QVDKRHFQGS PK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-14	B3 family protein