PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102022.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 587aa MW: 67097 Da PI: 8.054

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.2	8e-15	47	136	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +p+ + ++ l +p f+++ +g + + l++ +g+ W v + +k +++ +++GW +Fv++n +++g f+vF +dg+ f +k XP_028102022.1 47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134 88999999988875.******777655..5668***********..*****************************9998766..555 PP EE CS B3 96 vf 97 +f XP_028102022.1 135 LF 136 55 PP
2	B3	43	7.9e-14	469	546	10	89
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++++ l++p + +++h++k + l+l de+gr+W+ ++ ++ gr++lt GWk F+k n+Lk D ++ ++++ + XP_028102022.1 469 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 546 4566779********998..6668***********77776.5789*******************999876344 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER 60 LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF 120 LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED 180 ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE 240 DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE 300 DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCCLLNL DGNKRKATIK 360 DKGGNKRAYT MEVEEEEEET DDDEEEEEDE LEAKALRKKT ENGIGEKSTK GLKKINQGTS 420 YGNKGKDTIK GEGGNKRADT IAVEDDEDVF KYGMVSWPKN PCFVAKLRST RRTELYVPMD 480 VIRDHNLKLP SNLILLDEEG RKWSTRVVQW NDGRTWLTVG WKAFCKWNNL KWEDRCICEF 540 IRGKGRRGIF IKTCILRAGS WLPKKDSILS SDHQDQVDKR HFQGSPK

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER  60
LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF  120
LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED  180
ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE  240
DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE  300
DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCCLLNL DGNKRKATIK  360
DKGGNKRAYT MEVEEEEEET DDDEEEEEDE LEAKALRKKT ENGIGEKSTK GLKKINQGTS  420
YGNKGKDTIK GEGGNKRADT IAVEDDEDVF KYGMVSWPKN PCFVAKLRST RRTELYVPMD  480
VIRDHNLKLP SNLILLDEEG RKWSTRVVQW NDGRTWLTVG WKAFCKWNNL KWEDRCICEF  540
IRGKGRRGIF IKTCILRAGS WLPKKDSILS SDHQDQVDKR HFQGSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-14	B3 family protein