PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102021.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 592aa MW: 67787.4 Da PI: 5.4764

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.2	8.1e-15	47	136	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +p+ + ++ l +p f+++ +g + + l++ +g+ W v + +k +++ +++GW +Fv++n +++g f+vF +dg+ f +k XP_028102021.1 47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134 88999999988875.******777655..5668***********..*****************************9998766..555 PP EE CS B3 96 vf 97 +f XP_028102021.1 135 LF 136 55 PP
2	B3	43	8e-14	474	551	10	89
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++++ l++p + +++h++k + l+l de+gr+W+ ++ ++ gr++lt GWk F+k n+Lk D ++ ++++ + XP_028102021.1 474 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 551 4566779********998..6668***********77776.5789*******************999876344 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER 60 LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF 120 LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED 180 ELEANTLRKK TEKGKSEKST KGLKKIKQGT NYGNKGKATI KDKGGNKRAC RMEVEDEEEE 240 TDDDDEEEDE LEATTLRKKA EKGKSEKSTK GLKKINQGTC CLLNLDGNKR KATIKDKGGN 300 KRAYTMEVEE EEEETDDDEE EEEDELEAKA LRKKTENGIG EKSTKGLKKI NQGTSYGNKG 360 KATIKDKGGN KRAYTMEVEE EEEEETDDDD DEEDELEAKI LRKKTEKEKS EKSAKGLEKI 420 SQGTSYGNKG KDTIKGEGGN KRADTIAVED DEDVFKYGMV SWPKNPCFVA KLRSTRRTEL 480 YVPMDVIRDH NLKLPSNLIL LDEEGRKWST RVVQWNDGRT WLTVGWKAFC KWNNLKWEDR 540 CICEFIRGKG RRGIFIKTCI LRAGSWLPKK DSILSSDHQD QVDKRHFQGS PK

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER  60
LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF  120
LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED  180
ELEANTLRKK TEKGKSEKST KGLKKIKQGT NYGNKGKATI KDKGGNKRAC RMEVEDEEEE  240
TDDDDEEEDE LEATTLRKKA EKGKSEKSTK GLKKINQGTC CLLNLDGNKR KATIKDKGGN  300
KRAYTMEVEE EEEETDDDEE EEEDELEAKA LRKKTENGIG EKSTKGLKKI NQGTSYGNKG  360
KATIKDKGGN KRAYTMEVEE EEEEETDDDD DEEDELEAKI LRKKTEKEKS EKSAKGLEKI  420
SQGTSYGNKG KDTIKGEGGN KRADTIAVED DEDVFKYGMV SWPKNPCFVA KLRSTRRTEL  480
YVPMDVIRDH NLKLPSNLIL LDEEGRKWST RVVQWNDGRT WLTVGWKAFC KWNNLKWEDR  540
CICEFIRGKG RRGIFIKTCI LRAGSWLPKK DSILSSDHQD QVDKRHFQGS PK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-14	B3 family protein