PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102015.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 657aa    MW: 75019.5 Da    PI: 6.2416
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3469.5e-1547136197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv +p+  + ++ l +p  f+++ +g    + +  l++ +g+ W v +  +k +++  +++GW +Fv++n +++g f+vF +dg+  f   +k
  XP_028102015.1  47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134
                     88999999988875.********777655..5668***************..*******************************9998766..555 PP

                     EE CS
              B3  96 vf 97 
                     +f
  XP_028102015.1 135 LF 136
                     55 PP
2B342.89.4e-145396161089
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     ++++  l++p + +++h++k   +  l+l de+gr+W+ ++  ++  gr++lt GWk F+k n+Lk  D ++ ++++   +
  XP_028102015.1 539 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 616
                     4566779**********998..6668***************77776.5789*********************999876344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER  60
LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF  120
LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED  180
ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE  240
DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE  300
DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQGTCCLLNL DGNKRKATIK  360
DKGGNKRAYT MEVEEEEEET DDDEEEEEDE LEAKALRKKT ENGIGEKSTK GLKKINQGTS  420
YGNKGKATIK DKGGNKRAYT MEVEEEEEEE TDDDDDEEDE LEAKILRKKT EKEKSEKSAK  480
GLEKISQGTS YGNKGKDTIK GEGGNKRADT IAVEDDEDVF KYGMVSWPKN PCFVAKLRST  540
RRTELYVPMD VIRDHNLKLP SNLILLDEEG RKWSTRVVQW NDGRTWLTVG WKAFCKWNNL  600
KWEDRCICEF IRGKGRRGIF IKTCILRAGS WLPKKDSILS SDHQDQVDKR HFQGSPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203208LKKIKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-14B3 family protein