PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 399aa MW: 44282.9 Da PI: 8.9531 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.6 | 2.7e-07 | 224 | 246 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_028101965.1 224 HYCHVCGKGFKRDANLRMHMRAH 246 68*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
MISGATSCYP NVSQGLQMYG ITEADVVSSS LGPTSGSDTH SNSLLYSLSV LKEKVHQVQS 60 LVSIFISPPQ SQPAESTAIA IASMGTLIQE IIVTASAMMF TCQQMSLGST LGNNNTDESQ 120 NRRVKLPGVT GLSQQQPNCG PTRFVHVGEE SRQGFYSSET IDWYGDNYNT CSANDTNNNN 180 NNNRTITMTV GDKSEARSEK NELSPKNYDI IELDAADLLA KYTHYCHVCG KGFKRDANLR 240 MHMRAHGDEY KSSAALSNPL KNNNANETGN KDGGETKPVR KYSCPQEGCR WNKKHAKFQP 300 LKSMICVKNH YKRSHCPKMY VCKRCNRKQF SVLSDLRTHE KHCGDLKWQC SCGTTFSRKD 360 KLMGHVALFV GHTPAINSLA KMGRVEQQRD QAQMRVGNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22890.1 | 1e-116 | C2H2 family protein |