PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028101464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 195aa MW: 22153.8 Da PI: 10.1232 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.4e-18 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l ++++ +G + Wkt+a + g++R++k+c++rw++yl XP_028101464.1 17 KGAWTSEEDRKLTQYIEVHGAKKWKTVATKSGLNRCGKSCRLRWLNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.2 | 3.2e-17 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028101464.1 70 RGNISDEEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 115 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence |
MAPRNVNNGA GRKVYNKGAW TSEEDRKLTQ YIEVHGAKKW KTVATKSGLN RCGKSCRLRW 60 LNYLRPNIKR GNISDEEEDL IVRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSHLNKKIN 120 KGKTTSTSTA QERTTPEAAA GVSEVEREGG GGSRNPEVTF NVNEFFDFST EGTNGLEWVN 180 KFLELDDGQW ISEKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G40330.1 | 1e-53 | MYB family protein |