PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100876.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 339aa    MW: 36846.6 Da    PI: 6.6994
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.71.9e-11101145347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
   XP_028100876.1 101 PWTEEEHRMFLFGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 145
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTRRCSYCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYTGS SSGSLQNGLA  60
GNNHDSPGDT PDHGGAAGDG YASEDFVPGS SSSRERKKGV PWTEEEHRMF LFGLQKLGKG  120
DWRGISRNYV ISRTPTQVAS HAQKYFIRQC NASRRKRRSS LFDIVADESV DTPMESHDFF  180
TVNPQTETQT NNPLPDPPTL DEECESMDST NSNDGEQPVL QKPDSSQHCY PVMFPAYITQ  240
FLPFSVPFWL RGHSTEAAKM EETHEVLKPT AVHSKSPINV DELVGMSNLS IGESLGDAGP  300
SPLSLKLLEG SSSRQSAFQA NPGSGSSGVN SISNPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-133MYB_related family protein