PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 21061.8 Da PI: 6.5091 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 58.5 | 2.2e-18 | 45 | 126 | 1 | 87 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fY++YAke GF +++++skk e+ t C+ +gk++ +++k ++ +++++t+Ckak++ ++ dgkw + +++l+HnH XP_028100080.1 45 QFYQRYAKEKGFGMCIRSSKKV--GAEVRYVTVACNHSGKPKIKSSK---LHQLHPQSKTDCKAKIRANLLGDGKWILRSMVLDHNH 126 6*****************9998..8999**************99877...889999******************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MEEVSSGSES VGLNEGHNEI EIEKAESVED PKVGMLFDSI DDLFQFYQRY AKEKGFGMCI 60 RSSKKVGAEV RYVTVACNHS GKPKIKSSKL HQLHPQSKTD CKAKIRANLL GDGKWILRSM 120 VLDHNHGAGG HEKLTYLEKD CRNNMDRVRR IELGEGDAIA MHNYFLKMQA HNSEFFHMMD 180 LDEED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 5e-18 | FAR1 family protein |