PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099446.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 883aa MW: 100490 Da PI: 7.3979

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.5	3.2e-16	66	138	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++YA++vGFs+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l++++++++ w+vtk++++HnH+ XP_028099446.1 66 LYDTYARHVGFSTNVGQYSRNKPDGPIITWDFACSREIFKRKNVES--------------CNAMLRIERKDQDSWVVTKFVEDHNHS 138 6*************************************998877..............************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 883 aa Download sequence
MDVEVVEVDG GKRENNGKAN ISPNMGEKQG RARNSSDRDA PNQDDDEYTK PYVGMEFESE 60 EAAKTLYDTY ARHVGFSTNV GQYSRNKPDG PIITWDFACS REIFKRKNVE SCNAMLRIER 120 KDQDSWVVTK FVEDHNHSTA SLSKVHYLRP RRHFAGATKN VVETFDGPSD VFVSMDGNHV 180 SYDPNRGLRG ASPVDTNCPA RSFGPVNYGQ PCIRKRTLGK VAQNLLNYFK KMQAENPGFY 240 YAIQLDDDNR MTNVFWADAR SRTAYNHFGD AVIFDTMYRP NQFLVPFAPF TGVNNHGQMV 300 LFGCALLLDE SESSFTWLFR TWLAAMNDRP PVSITTDQDR AIQASVARVF PETRHCICKW 360 HILREGQERL AHVYLAHPSF YGELYSCINF SETTEDFESS WGSLLDRYDL RNNEWLQAVY 420 NARQQWAPVY FRGTFFAALS SNQGVSSFFD GFVNQQTTIP MFFKQYERAL ENSLEKEIEA 480 DYDTICTTPV LKTPSPMEQQ AANLYTKKVF AKFQEELVET FVYTANKIEG DDVVSKFRVA 540 KYEHDDKAYI VTLNISEMKA SCSCQMFEYS GIICRHILTV FTVTNVLTLP SHYILKRWMR 600 NARVGSGSEE HDAHTQGIES LTSRFNNLCR EAIKYAEEGA IAAETYNTAM SVLKEGARKI 660 AAVKKNVAKV TPPSQGSGST QEDSNKKNPT SPSDMIPPLW PWQDAMPHRF NLNDAGVPAA 720 DLNQPSMAPI SITRDGGPPD NMVVFTCFKS MTWVIENKNS TPASKVAVIN LKLQDYGKTP 780 SGETEVQFRL TRVTLEPMLK SMTYISQQLS APASRVAVIN LKVQWRLDKL LLLLQNYLFP 840 TSIFKYEIFP SPRYKNDYWR NRGEISSFKR DTRLYVKING LHS

Sequence ? help Back to Top

Protein Sequence Length: 883 aa Download sequence

MDVEVVEVDG GKRENNGKAN ISPNMGEKQG RARNSSDRDA PNQDDDEYTK PYVGMEFESE  60
EAAKTLYDTY ARHVGFSTNV GQYSRNKPDG PIITWDFACS REIFKRKNVE SCNAMLRIER  120
KDQDSWVVTK FVEDHNHSTA SLSKVHYLRP RRHFAGATKN VVETFDGPSD VFVSMDGNHV  180
SYDPNRGLRG ASPVDTNCPA RSFGPVNYGQ PCIRKRTLGK VAQNLLNYFK KMQAENPGFY  240
YAIQLDDDNR MTNVFWADAR SRTAYNHFGD AVIFDTMYRP NQFLVPFAPF TGVNNHGQMV  300
LFGCALLLDE SESSFTWLFR TWLAAMNDRP PVSITTDQDR AIQASVARVF PETRHCICKW  360
HILREGQERL AHVYLAHPSF YGELYSCINF SETTEDFESS WGSLLDRYDL RNNEWLQAVY  420
NARQQWAPVY FRGTFFAALS SNQGVSSFFD GFVNQQTTIP MFFKQYERAL ENSLEKEIEA  480
DYDTICTTPV LKTPSPMEQQ AANLYTKKVF AKFQEELVET FVYTANKIEG DDVVSKFRVA  540
KYEHDDKAYI VTLNISEMKA SCSCQMFEYS GIICRHILTV FTVTNVLTLP SHYILKRWMR  600
NARVGSGSEE HDAHTQGIES LTSRFNNLCR EAIKYAEEGA IAAETYNTAM SVLKEGARKI  660
AAVKKNVAKV TPPSQGSGST QEDSNKKNPT SPSDMIPPLW PWQDAMPHRF NLNDAGVPAA  720
DLNQPSMAPI SITRDGGPPD NMVVFTCFKS MTWVIENKNS TPASKVAVIN LKLQDYGKTP  780
SGETEVQFRL TRVTLEPMLK SMTYISQQLS APASRVAVIN LKVQWRLDKL LLLLQNYLFP  840
TSIFKYEIFP SPRYKNDYWR NRGEISSFKR DTRLYVKING LHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein