PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097999.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 643aa MW: 71954 Da PI: 6.897

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.2e-09	417	454	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_028097999.1 417 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 454 554459******************************88 PP
2	BELL	109.6	1.9e-35	280	348	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+ka+L s+leeV +rY++y++q+++v+ssFeavag g+a +Y +lA+ka+SrhFrcL+d i++qi XP_028097999.1 280 ELQKRKARLFSMLEEVGRRYRHYCDQMKAVVSSFEAVAGNGAAVVYSALASKAMSRHFRCLRDGIVGQI 348 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MTCQGGEEKP RNMASSSGYC YSDVSSTNPN IQSHDLLNHE LQLQSFESNN AEIYNLTTGM 60 EMIGFPPPKN HDTDTNSAMW KGFFAKTSGG GGGDGFNKPD FTPGVLSDSE NLMVASESTA 120 WHEQNRFIVD DSSMRCVFPC EGNEKPSQGL SLSLSSTNPS TIGLQSFELR QQEDDRSSDG 180 LIFAKSMNFQ QHQHMIQDGY LGKDSNLDHH HRHHGAFQIR NSKYLGPAQE LLNEFCNLGT 240 KQTDPKPKIK PPHKTSQWQD ENISSSSSKK QTLHTLELLE LQKRKARLFS MLEEVGRRYR 300 HYCDQMKAVV SSFEAVAGNG AAVVYSALAS KAMSRHFRCL RDGIVGQIRV TKKAMGENDT 360 NVVPGGTRGE TPRLRVLDLS LRQQRAFQQM SMMESHPWRP QRGLPERSVS VLRAWLFEHF 420 LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EEMYFEETKE QQHNNINVAS 480 SDDNNNGRIP DQTHPDDRKP TPNQVVQIDS ECLSSIINNN PEKNDTNHTK NPPNQPPHHP 540 HHPHHSFGRV ADTFSAAELN FSTYNHQGGG GGGGGVTLTL GLQQHGGGGV SLAFSPPSQN 600 SLFYGRDHME ECQQVQYSIL DGEVQNLPYR NLMGAQLLHD LAG

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MTCQGGEEKP RNMASSSGYC YSDVSSTNPN IQSHDLLNHE LQLQSFESNN AEIYNLTTGM  60
EMIGFPPPKN HDTDTNSAMW KGFFAKTSGG GGGDGFNKPD FTPGVLSDSE NLMVASESTA  120
WHEQNRFIVD DSSMRCVFPC EGNEKPSQGL SLSLSSTNPS TIGLQSFELR QQEDDRSSDG  180
LIFAKSMNFQ QHQHMIQDGY LGKDSNLDHH HRHHGAFQIR NSKYLGPAQE LLNEFCNLGT  240
KQTDPKPKIK PPHKTSQWQD ENISSSSSKK QTLHTLELLE LQKRKARLFS MLEEVGRRYR  300
HYCDQMKAVV SSFEAVAGNG AAVVYSALAS KAMSRHFRCL RDGIVGQIRV TKKAMGENDT  360
NVVPGGTRGE TPRLRVLDLS LRQQRAFQQM SMMESHPWRP QRGLPERSVS VLRAWLFEHF  420
LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EEMYFEETKE QQHNNINVAS  480
SDDNNNGRIP DQTHPDDRKP TPNQVVQIDS ECLSSIINNN PEKNDTNHTK NPPNQPPHHP  540
HHPHHSFGRV ADTFSAAELN FSTYNHQGGG GGGGGVTLTL GLQQHGGGGV SLAFSPPSQN  600
SLFYGRDHME ECQQVQYSIL DGEVQNLPYR NLMGAQLLHD LAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-130	TALE family protein