PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 281aa MW: 31969.9 Da PI: 8.0745 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l +++q+G ++W++ ++ g+ R++k+c++rw +yl XP_028097711.1 14 KGPWTPQEDQILTSYIQQHGHNNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1e-15 | 67 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++ +++lG++ W++Ia++++ gRt++++k+ w++yl XP_028097711.1 67 RGNFSKEEEETIINWHEMLGNRcvsIWSAIAARLP-GRTDNEIKNVWHTYL 116 89*********************************.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MVRAPCCEKT GLKKGPWTPQ EDQILTSYIQ QHGHNNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SKEEEETIIN WHEMLGNRCV SIWSAIAARL PGRTDNEIKN VWHTYLKKRP 120 KNYHTTSNNK EQSITVPKFD SNASIESKSM KFHIPTHPRN ESPGCAPSSP QQSYSELSSV 180 TDLAGLPNNM VIKNESETFS QVDESFWSKK LSAEKSNMKS DFSSNGDELQ FLVSSIPAAT 240 ATNSTMEHGN NKCSFNIDDD MDFWYNLLIR TGGHLPELPE F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-78 | MYB family protein |