PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028096986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 110aa MW: 12563.5 Da PI: 10.6783 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.7 | 7.3e-29 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +ri+n snrqvtfskR+ng+ KKA ELSvLCd+eva+iifss+gkl+e+ XP_028096986.1 9 ERIKNMSNRQVTFSKRKNGLAKKALELSVLCDVEVALIIFSSHGKLHEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 14.8 | 1.2e-06 | 78 | 108 | 8 | 38 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhl 38 +++++++esl+ el+kLk+ e+Lq++qR l XP_028096986.1 78 AKTTTEQESLYLELTKLKATCESLQHSQRSL 108 35778899*********************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MGRGKVVLER IKNMSNRQVT FSKRKNGLAK KALELSVLCD VEVALIIFSS HGKLHEFGSS 60 SVRQTIQRYR RCRCTSQAKT TTEQESLYLE LTKLKATCES LQHSQRSLNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 3e-37 | MIKC_MADS family protein |