PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096472.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 257aa    MW: 28744.8 Da    PI: 6.2981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.3e-053987254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  + erE+  Rd++N+ f +L   l ++    ++ + Ka+iL  A++ +++L
  XP_028096472.1 39 KIHKAEREKLKRDHLNDLFLKLGNTLDPS----HENNGKASILSNATRLLRDL 87
                    567889********************998....78999999******999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MSMVSEASVE SSDDNNVVSE EPIIRSSCSK KNPRKVPKKI HKAEREKLKR DHLNDLFLKL  60
GNTLDPSHEN NGKASILSNA TRLLRDLLAQ VDCLKMENTT LLSESHYVST ETNELREENS  120
TLQGQVEELN SEVQERIHSN SAWELHHSRS HHDTASQFKE GQLIIPVIDH ASQPATVLGP  180
LYVPLHHHDL QVYHNSDTLE SVSKLPSNIS KPHARYPSSS DSWPSQILSK QSEPTQVAQH  240
SSSIPSSLAD ETSFNNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.22e-39bHLH family protein