PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028096339.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 405aa MW: 45977.2 Da PI: 6.561

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028096339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++ ++ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_028096339.1 16 VPPGFRFHPTEEELLQYYLRKKVSYEKIDL-DVIRDVDLNKLEPWDIQEkcRIGSaPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 109 69**************************.9***********952433333556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_028096339.1 110 YS-NPRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 .9999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MPENNMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVSY EKIDLDVIRD VDLNKLEPWD 60 IQEKCRIGSA PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNPRRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLLDDNVP DTNNISDATG EATQEEGWVV CRIFKKKNHH 180 KTLDSNNNHI INVETRTQIP GSTSGEGTLE QILHYMGRTC KDEGFLMPIV DTAMKNGLQL 240 HDRIFMKLPN LESPSQLCNY QQIQVQMLTD IIVDESSITN NNNNCHVNNA GIGTGTGTGD 300 PIPPNSPYQS ETASFNDWTS LDRLVASQLN GQSETSKQLA CFNDSTMALC SPSYHDFQLQ 360 HQLRSSRPFH HLGTQDDNGE FDLWNFTRSS SSSADPLCHV SNTPV

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MPENNMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVSY EKIDLDVIRD VDLNKLEPWD  60
IQEKCRIGSA PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNPRRIGMRK  120
TLVFYKGRAP HGQKSDWIMH EYRLLDDNVP DTNNISDATG EATQEEGWVV CRIFKKKNHH  180
KTLDSNNNHI INVETRTQIP GSTSGEGTLE QILHYMGRTC KDEGFLMPIV DTAMKNGLQL  240
HDRIFMKLPN LESPSQLCNY QQIQVQMLTD IIVDESSITN NNNNCHVNNA GIGTGTGTGD  300
PIPPNSPYQS ETASFNDWTS LDRLVASQLN GQSETSKQLA CFNDSTMALC SPSYHDFQLQ  360
HQLRSSRPFH HLGTQDDNGE FDLWNFTRSS SSSADPLCHV SNTPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-119	NAC family protein