PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096316.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 364aa    MW: 42576 Da    PI: 5.4805
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.91.2e-1175121147
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                     +fYn+Y  +vGF++rks+ +k+k+++eit+rtfvC+keg++  +k++
  XP_028096316.1  75 DFYNNYDGKVGFRIRKSYAHKNKQTKEITSRTFVCYKEGTQGFDKRD 121
                     6**************************************99888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MVEECDSDDE EGRMAEGGDD NGKGWRIAEG RDATAMRDCD HEKVMEENNV VDELGSCGWK  60
PKLDMSFDSE QATYDFYNNY DGKVGFRIRK SYAHKNKQTK EITSRTFVCY KEGTQGFDKR  120
DPLAKFPRQE GIWWKSNTWL HKIGPKNYLR SKRQKDLKYG EAGSVLQYFC KKTVKNPSFY  180
YAVQLDCEEQ ISNIFCADAQ MIMDYTQFGD VVTFDTTYKL NNEHRPFGTF VGFNHHRETV  240
IFSVALMYDE TAESFTWLFQ IFLEEMLNKA PKTIFTDQDA AMAKAIPIIM PTKNHPLCTW  300
HLMQNAVKHV SSLFEVVGVK GVFSKFMHEI DDEEEFRIQW EQMLDRYDAR NNHWLEQTFG  360
VKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.18e-43FAR1 family protein