PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095546.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 343aa    MW: 37596.4 Da    PI: 9.254
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-13102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r + + Rt+ q+ s+ qky
   XP_028095546.1 102 PWTEEEHRLFLLGLQKLGKGDWRGISRNFVTSRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MGRRCSHCSH KGHNSRTCPW RGGGGCVKLF GVRLTDGSII KKSASMGNLS AHYHSSSSAA  60
AASPNPTTSP SEDPIPDPDG YLSDDPAQAT NRRKKVWFPG VPWTEEEHRL FLLGLQKLGK  120
GDWRGISRNF VTSRTPTQVA SHAQKYFIRH SNATRRKRRS SLFDMVPEMG TDPPTVPEEQ  180
FMLPPSRAVD TDPFHSLPLL NLSLNRDFEH MEATSDEKVK GHKETAMASN AGASAFFPAH  240
LPVPFPLWPS NTAPLEEESA VEMSRHQVLR PIPLLPKEPV NVDELVGMSQ LSLGETESRG  300
IESSTLCLNL FLGAPSRRSA FHASAPVNRS YVSKGKSNAI QAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.13e-75MYB_related family protein