PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094937.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 663aa MW: 74396.9 Da PI: 4.7973

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.3	9.7e-07	477	509	18	55
HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++f Lr+++P+ + K +Ka+iL +A+eY+k+L+ XP_028094937.1 477 EKFLVLRSMVPSiS------KIDKASILGEAIEYLKELE 509 57889*****66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MCWAMANGVQ NQEGVPENLR MQLAVAVRSV QWSYAIFWSL STKQEGVLEW GEGYYNGEIK 60 TRKTVQAMEL KADKMGLRRS EQLRELYECL LEGETDQQAK RPSAALSPDD LTDAEWYYLV 120 CMSFVFNPGQ GLPGRALAND QPIWLCDAHS ADSKVFSRSL LAKSASIQTV ICFPYLGGVI 180 ELGVTDLVLE DPSLIQHIKA SLLEFSKPDC SEKSSSTPHN RDGDADCVYA KVDHEIANTM 240 ALENFYSPKE EIRFDQEGLN EIDGNVQDDF TMGSPDDCSN GCEHNHQTED SFLLEGINGG 300 SASQVQSWHF MDDDFSNCVQ GSVNSSDCIS QVFVNQEKGI SISHPNGENM NNSHLKELQE 360 RNDTKLSSLD LGTDDELHYK RTLSAVLKNS HLFLDNLCVR GSGSSFVSWK KGEIFNGHRP 420 RVLQKMLKMI LFNVPLMHGC SSLKSQQQNG RNDGLLKPES DEIYVQCAFP EKRMEDEKFL 480 VLRSMVPSIS KIDKASILGE AIEYLKELEA RVEELESCVD FADHEARGRR KYPDVVEQTS 540 DNYENRRIEN SKKPWMNKRK ASDIGETEPE LISSVVPKNG PILDMKVNVK EHEVVIEMRC 600 PWREYLLLDI IDVMNNLNLD AHSVQSSTVD GILTVTLQSK FRGAAVASAR MIKQALSTIA 660 GKC

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MCWAMANGVQ NQEGVPENLR MQLAVAVRSV QWSYAIFWSL STKQEGVLEW GEGYYNGEIK  60
TRKTVQAMEL KADKMGLRRS EQLRELYECL LEGETDQQAK RPSAALSPDD LTDAEWYYLV  120
CMSFVFNPGQ GLPGRALAND QPIWLCDAHS ADSKVFSRSL LAKSASIQTV ICFPYLGGVI  180
ELGVTDLVLE DPSLIQHIKA SLLEFSKPDC SEKSSSTPHN RDGDADCVYA KVDHEIANTM  240
ALENFYSPKE EIRFDQEGLN EIDGNVQDDF TMGSPDDCSN GCEHNHQTED SFLLEGINGG  300
SASQVQSWHF MDDDFSNCVQ GSVNSSDCIS QVFVNQEKGI SISHPNGENM NNSHLKELQE  360
RNDTKLSSLD LGTDDELHYK RTLSAVLKNS HLFLDNLCVR GSGSSFVSWK KGEIFNGHRP  420
RVLQKMLKMI LFNVPLMHGC SSLKSQQQNG RNDGLLKPES DEIYVQCAFP EKRMEDEKFL  480
VLRSMVPSIS KIDKASILGE AIEYLKELEA RVEELESCVD FADHEARGRR KYPDVVEQTS  540
DNYENRRIEN SKKPWMNKRK ASDIGETEPE LISSVVPKNG PILDMKVNVK EHEVVIEMRC  600
PWREYLLLDI IDVMNNLNLD AHSVQSSTVD GILTVTLQSK FRGAAVASAR MIKQALSTIA  660
GKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-178	bHLH family protein