PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093396.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 135aa MW: 15370.4 Da PI: 7.5241 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 49.5 | 9.4e-16 | 12 | 101 | 13 | 99 |
NF-YC 13 atdfk..nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivprd 99 ++d++ ++P +r+kki+k d+d++++ +ea l+s + +lf+ l+ +s a e+kr+t+k + av+r + + dfl+d p + XP_028093396.1 12 NNDIEtiSPTFPNSRVKKIMKLDKDINKVNSEALFLISCSTDLFLQFLAEKSARVAIEKKRKTIKLEHLRVAVKRHQpTSDFLLDSLPMS 101 4444433678***************************************************************9976489*****99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MADEEEDEEN NNNDIETISP TFPNSRVKKI MKLDKDINKV NSEALFLISC STDLFLQFLA 60 EKSARVAIEK KRKTIKLEHL RVAVKRHQPT SDFLLDSLPM SSQPADRPPE ARTRSAEKPV 120 PAGTRRIDDF FQKGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 9e-52 | NF-YC family protein |