PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093005.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 669aa MW: 77509.2 Da PI: 6.4357

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.9	2.9e-22	59	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAk GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++ +++ ++++w+ +++eleHnH+++ XP_028093005.1 59 DFYNVYAKGQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIIIRLVDSKRWRTIEVELEHNHPVS 143 6*******************999*************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MEVVCLNTEP VFDEDDEYED EGDCSLMEHD DEIGETQSKK EPPPPTVGLE FDSFDEAYDF 60 YNVYAKGQGF GIRVSNSWFR SKRKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMII 120 IRLVDSKRWR TIEVELEHNH PVSPDVKRFY KSHKKMIIAA KKAQQSEPTT EIHTIKLYRT 180 AAVDAVCNGY SNVDEREGRS PINHSKHLQL KEGDAHAVYN YFCRMKLTNP NFFYLMDLDD 240 EGRLKNVFWA DARSRAAYSY FCDTIAIDTT CLANKFEIPL ISFVGVNHHG QSILLGCGFL 300 GHESVECFVW IFRAWLACML GHPPQVVITD QSKPLQNAVS VVFPEAHHCY CLWYIMQRVP 360 EKLGGLKGFE AIKRQLNKAV YDSLKIAEFE TSWGGLIECH GLGDHKWLQA LYEDRQRWVP 420 VYLKDIPSAG MIPIKENEGL TAFFDGYVHK HTSFKEFVDK YDLALQRKHL KEAMGDLESR 480 NSSLELKTRC NFELQLSKVY TKEIFKKFQA EVEGMYSCFN TKQVSVSGPI ITYVVKERVE 540 VEGSEKEVRY YEVLYETTQV DIRCICSLFN FKGYLCRHAL NVLNYNGVEE IPSRYILLRW 600 CKDFKRRYLI DCDANDDNVD NPLQWYNHLY RRVIQVVEEG AQSQEQYKVA LQGLEELLHK 660 FSLAEDNLF

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MEVVCLNTEP VFDEDDEYED EGDCSLMEHD DEIGETQSKK EPPPPTVGLE FDSFDEAYDF  60
YNVYAKGQGF GIRVSNSWFR SKRKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMII  120
IRLVDSKRWR TIEVELEHNH PVSPDVKRFY KSHKKMIIAA KKAQQSEPTT EIHTIKLYRT  180
AAVDAVCNGY SNVDEREGRS PINHSKHLQL KEGDAHAVYN YFCRMKLTNP NFFYLMDLDD  240
EGRLKNVFWA DARSRAAYSY FCDTIAIDTT CLANKFEIPL ISFVGVNHHG QSILLGCGFL  300
GHESVECFVW IFRAWLACML GHPPQVVITD QSKPLQNAVS VVFPEAHHCY CLWYIMQRVP  360
EKLGGLKGFE AIKRQLNKAV YDSLKIAEFE TSWGGLIECH GLGDHKWLQA LYEDRQRWVP  420
VYLKDIPSAG MIPIKENEGL TAFFDGYVHK HTSFKEFVDK YDLALQRKHL KEAMGDLESR  480
NSSLELKTRC NFELQLSKVY TKEIFKKFQA EVEGMYSCFN TKQVSVSGPI ITYVVKERVE  540
VEGSEKEVRY YEVLYETTQV DIRCICSLFN FKGYLCRHAL NVLNYNGVEE IPSRYILLRW  600
CKDFKRRYLI DCDANDDNVD NPLQWYNHLY RRVIQVVEEG AQSQEQYKVA LQGLEELLHK  660
FSLAEDNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein