PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092713.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 687aa    MW: 77516 Da    PI: 6.4351
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3665.2e-1123136832374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++c +a++  d + +++ L+r+++++s +gd ++Rla+yf++AL+arla++++ ly  + ps+t + + +++l++++++++++P+ k+s+l
  XP_028092713.1 313 QTLLTQCSQAIARADVRSVNEQLNRIRQHSSAQGDGIERLAHYFANALEARLAGTGTALY--V-PSSTMRISAADVLKSYETYVKACPFNKMSNL 404
                     689***************************************************888888..3.3344446699********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN+ I++ +++++++Hii f+i +G+QW++L++ L++Rp+gpp+lRiTg++ p++g   +e++e+tg+rL+ ++++++v+fe+++ +ak++e++
  XP_028092713.1 405 YANRSIMKLAQTATTLHIIHFGILYGFQWACLIHHLSARPGGPPKLRITGIDFPQPGfhPAERVEQTGRRLETYCKRFNVQFEYTA-IAKKWETI 498
                     ********************************************************999***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     el+eL+++++E+l+Vn+ ++l +++de+v  +++rd vL+lv++++P+++++   +  +n++ F++rf eal ++s++fd++ea++pre+ +r++
  XP_028092713.1 499 ELDELKIDRDEVLVVNCLFRLGNVPDETVLANNPRDIVLNLVQRIKPDMFIHGVVNGMYNAPFFVARFREALFHFSSIFDMFEATIPREDGDRVM 593
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+e+ gr+i+nv+aceg+er+er et+++W+ r  +aGFk++pl+++ +k ++++++ ++ + + v+e+ +++++gWk+r L+++S+W+
  XP_028092713.1 594 LEKEIYGRDIMNVIACEGTERVERPETYKQWQIRTLRAGFKQLPLNQDLVKLVRSIVKVHYHKDFVVDEDGNWMLQGWKGRILYALSCWK 683
                     *************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
MDFPFLSRAS KPIYKSDSSS SSDVNSVSHA SSEEGAFSDA TLKFINQMLM EEDDLEDKPC  60
MFRECLALQA TEKSFYDALG EKYPPPSSNA DHVFDLNPSP DDHSPDGESS DSPGSVNYFV  120
EPNWVRDQEK LERSSSDFGT TFDPVSQSIG SSNGSGDGSV DTLVNQSQPF WLSSGGNTKV  180
AELVSNKKIV NYGLEMKEKN SKVVAQEEKN RRDHSPNGSR EKKTHHRGNG DNADDDRTNK  240
QLASYTDDSD EQLKMFNIVF LSSDLHQGSR LCLHHDDNDS AKKLQQSGPS KGSNGGKGRG  300
RKQGNKKEMF DLQTLLTQCS QAIARADVRS VNEQLNRIRQ HSSAQGDGIE RLAHYFANAL  360
EARLAGTGTA LYVPSSTMRI SAADVLKSYE TYVKACPFNK MSNLYANRSI MKLAQTATTL  420
HIIHFGILYG FQWACLIHHL SARPGGPPKL RITGIDFPQP GFHPAERVEQ TGRRLETYCK  480
RFNVQFEYTA IAKKWETIEL DELKIDRDEV LVVNCLFRLG NVPDETVLAN NPRDIVLNLV  540
QRIKPDMFIH GVVNGMYNAP FFVARFREAL FHFSSIFDMF EATIPREDGD RVMLEKEIYG  600
RDIMNVIACE GTERVERPET YKQWQIRTLR AGFKQLPLNQ DLVKLVRSIV KVHYHKDFVV  660
DEDGNWMLQG WKGRILYALS CWKPIED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein