PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028092576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 30101.2 Da PI: 9.9011 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.7e-19 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W+t+a+ g++R +k+c+ rw +yl XP_028092576.1 21 KGPWTAEEDRLLIEYVKLHGEGRWNTVASLAGLKRNGKSCRFRWVNYL 68 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.7 | 2e-16 | 74 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++d+++++G++ W+ Iart++ gRt++++k++w+++ XP_028092576.1 74 RGQITPHEETIILDLHARWGNR-WSMIARTLP-GRTDNEIKNYWRTH 118 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MSWGAMAKHL GWDVIEQEWR KGPWTAEEDR LLIEYVKLHG EGRWNTVASL AGLKRNGKSC 60 RFRWVNYLRP DLKRGQITPH EETIILDLHA RWGNRWSMIA RTLPGRTDNE IKNYWRTHFK 120 KKSKASPNNN EKAKARLLRK QQFQQQQQQQ QQRRQQINQV DMKKRMSYLL DENENGVPSL 180 AHQVRQEMAT TMNPNTADEQ GLLYSMFIGY AYVPEPPKED NILWEGLWNL DDNAHGNLGM 240 ACAPNKACLH SLSTPFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 6e-87 | MYB family protein |