PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092096.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 694aa    MW: 77868.6 Da    PI: 5.7478
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.72.9e-1013186872374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lL++c +a++s d++ a+ lL+++++++sp+gd ++Rla+y+++AL+arla+++  + +    ++ s    +++l+a+++f  +sP+ k+s++
  XP_028092096.1 318 MTLLTQCSQAMASTDNRTANDLLKQIRQHSSPRGDGTERLAHYIANALEARLAGTGRAVDAPHLIKRLS---AADTLKAYEAFLTASPFQKVSFF 409
                     679***************************************************666666555555555...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                       N+ Il+ +e+++++HiiDf+i++G+QWp+L+q L+ Rp+gpp++RiTg++ p++g   +e+ eetg+ La ++e+++vpfe+n  vak+++++
  XP_028092096.1 410 FGNKLILKLAEKATQIHIIDFGITHGFQWPNLIQHLSRRPGGPPRVRITGIDFPQAGfrPEERAEETGRLLAYYCEKFNVPFEYNS-VAKKWDTI 503
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++e+L++k++E+laVn+ + l  +lde+ + +  rd+vL+l+k+++P+++++   +  ++++ F++rf e l    ++fd+++a lpr+++ r+ 
  XP_028092096.1 504 RVEDLKIKRDEVLAVNCLYWLRCVLDETIEGSP-RDAVLNLIKRTNPDLFIHGIVNGTYSAPFFVTRFREVLFQAYSMFDMFDAVLPRDNQGRML 597
                     *************************88887776.************************************************************* PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Ere+lg   ++v+aceg+er+ r et+++W+ r ++aG++++pl+ ++++++++ +r  + + + ++ + +++++gWk+r   ++S+W+
  XP_028092096.1 598 YEREVLGGGTMSVIACEGTERVVRPETYKQWQIRNTKAGLRQLPLDPEIMEDVRAKVRLGYHKDFVLDVDGNWMLQGWKGRISSAISCWK 687
                     ************************************************************9888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MDDLVQEYRH FGRMNLFGFD HILIPSESDH HEFGFLSNHP NPINLGPQGN VYDAVLKYIT  60
QMLMDDEDLE TRSSVFQDSL ALQQAEKSLY DLLGEKYPPS PNPNPPPVCE NAESPDDDFI  120
SSRCSCVSNN SSASVSNVID CSPIGDLNKF GGSLVVQSSR VDNHNFDAVD GTVDSLVDSF  180
QVLDPSNGSQ AISWFREVEG VGEVTQILPK EEAEKNRQSR GKKSHYREDG DDLEAGRSNK  240
QLASYAENFD EQSEMYDELL LGPALNPHLH NGSSAFLSDE APQSGVGGKL EKNGQATGSS  300
GRKPHRKKGN KREVVDLMTL LTQCSQAMAS TDNRTANDLL KQIRQHSSPR GDGTERLAHY  360
IANALEARLA GTGRAVDAPH LIKRLSAADT LKAYEAFLTA SPFQKVSFFF GNKLILKLAE  420
KATQIHIIDF GITHGFQWPN LIQHLSRRPG GPPRVRITGI DFPQAGFRPE ERAEETGRLL  480
AYYCEKFNVP FEYNSVAKKW DTIRVEDLKI KRDEVLAVNC LYWLRCVLDE TIEGSPRDAV  540
LNLIKRTNPD LFIHGIVNGT YSAPFFVTRF REVLFQAYSM FDMFDAVLPR DNQGRMLYER  600
EVLGGGTMSV IACEGTERVV RPETYKQWQI RNTKAGLRQL PLDPEIMEDV RAKVRLGYHK  660
DFVLDVDGNW MLQGWKGRIS SAISCWKPAQ EIKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-168GRAS family protein