PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092091.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 702aa    MW: 79237.1 Da    PI: 6.189
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.53.2e-1153256971374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL +cA+av++ d ++a++lL+r++++asp+gd ++Rla yf++AL+arla+++++ly+a+++++ s   +++ l+ +++f +++P+ k+s+
  XP_028092091.1 325 LRTLLSQCAQAVANADIRNANELLNRIRQHASPTGDGTERLAYYFANALEARLAGTGTSLYAAFKTKRIS---VADILKGYQVFMKACPFNKMSN 416
                     5789************************************************************999999...********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     + aN+ I   v+ ++++HiiDf++ +G+QWp+L+q ++ R++gpp +lR Tg++ p++g   ke++eetg+rLa ++++++vpfe+++ +ak+++
  XP_028092091.1 417 MFANKSIAALVHAKQTLHIIDFGVLYGFQWPCLIQHFSVREGGPPkKLRFTGIDFPQPGfrPKERVEETGRRLAIYCKRFNVPFEYTA-IAKKWS 510
                     *****************************************888889***********9*****************************.7***** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     ++eleeL+++++E+l+Vn+ ++l +++de+v  +s+rd+vL+lvk+++P+++++   +  +n++ F++rf eal ++sa fd +e++lpre++ r
  XP_028092091.1 511 TIELEELNIDRDEVLVVNCLYRLRNVPDETVVESSPRDAVLNLVKRINPDMFIHGVINGTYNAPFFVTRFREALFHFSAGFDVFETTLPREDQGR 605
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E+e+lgr+++nv+aceg+er+er et+++W+ r ++aGF++++l+++ ++++k+ ++ ++++ + v+e+ ++l++gWk+r ++++S+W+
  XP_028092091.1 606 MLYEKEILGRDVMNVIACEGTERVERPETYKQWQVRNTRAGFRQLQLNKELVTEVKTKVKLYYNENFVVDEDGKWLLQGWKGRIMFALSCWK 697
                     ***************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    
MSMEALIQRF TGSFLDRNHH TYPDLPFNLV DGDAIHASPS PPTSVVSSEG DAGEEGDFSD  60
ATLKLISQML MEDGLENKPC MYQDCLALQA TEKSFYDVLG KQYPPHLSSD DNSPRTCSSD  120
SSNSSVSVND FIDQSSWIRE KFKPSYYDEY TFESIMQSIS SPNGSGDGSV DSLPFQISSE  180
AKFGELVPTT DYVNYRSEST WKVLEGAEQN QGDHPPHGSR EKKTHNREDA DYTDGAGRSN  240
KQLASFAEEA DDQLYDKVLL CPRLNPHLHQ DEPLHFLCTE HDDDDASSIV AGRKSPQNGV  300
AAKGANGGGR GRGKKQGNKK EVIDLRTLLS QCAQAVANAD IRNANELLNR IRQHASPTGD  360
GTERLAYYFA NALEARLAGT GTSLYAAFKT KRISVADILK GYQVFMKACP FNKMSNMFAN  420
KSIAALVHAK QTLHIIDFGV LYGFQWPCLI QHFSVREGGP PKKLRFTGID FPQPGFRPKE  480
RVEETGRRLA IYCKRFNVPF EYTAIAKKWS TIELEELNID RDEVLVVNCL YRLRNVPDET  540
VVESSPRDAV LNLVKRINPD MFIHGVINGT YNAPFFVTRF REALFHFSAG FDVFETTLPR  600
EDQGRMLYEK EILGRDVMNV IACEGTERVE RPETYKQWQV RNTRAGFRQL QLNKELVTEV  660
KTKVKLYYNE NFVVDEDGKW LLQGWKGRIM FALSCWKPVK ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-173GRAS family protein