PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091375.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 442aa MW: 49393.8 Da PI: 7.1944

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	2.9e-13	268	313	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ++Er+RR+++N++f Lr+++P+ +++Ka++L Av YIk+L XP_028091375.1 268 NHVQAERQRREKLNNRFYALRSVVPNV-----SRMDKASVLADAVSYIKEL 313 6999********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MAEIISSSSS PLLLFHGTTP PIQQRLQFIM QSRSEWWVYA IFWQASEDSN DRFLLSWCNG 60 HFRGTKHYAS SKAKLSTNNG HDHGHDPEWF YMVSVTKSFV DGDDIVGRSF SSGAYVWLTG 120 DHELQFYDCE RTKEAHGHGI QTLVCISTSN GVIELGSSEI IKEDWSLLQL AKSLFGSDSE 180 DITSVSKQPQ ILFPPNPNLS LLDFGVPKES YEERNMKKEI TTTTCRSLSE SGASDLEGPF 240 FSNSKLMNIR SKKRGRKTVR SRETPPINHV QAERQRREKL NNRFYALRSV VPNVSRMDKA 300 SVLADAVSYI KELKAKVGEL EAKHRVESQS HKAKVCMTDM YNNNPSAFSS SSSSSYGIAN 360 AADAEVEVKM LGTDAMIQVH CVDVNYPCAR LMDTLRGLDF GVTHASVSKV KELILQDVVV 420 TIPNGITSVE SLTTAILTRF QI

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MAEIISSSSS PLLLFHGTTP PIQQRLQFIM QSRSEWWVYA IFWQASEDSN DRFLLSWCNG  60
HFRGTKHYAS SKAKLSTNNG HDHGHDPEWF YMVSVTKSFV DGDDIVGRSF SSGAYVWLTG  120
DHELQFYDCE RTKEAHGHGI QTLVCISTSN GVIELGSSEI IKEDWSLLQL AKSLFGSDSE  180
DITSVSKQPQ ILFPPNPNLS LLDFGVPKES YEERNMKKEI TTTTCRSLSE SGASDLEGPF  240
FSNSKLMNIR SKKRGRKTVR SRETPPINHV QAERQRREKL NNRFYALRSV VPNVSRMDKA  300
SVLADAVSYI KELKAKVGEL EAKHRVESQS HKAKVCMTDM YNNNPSAFSS SSSSSYGIAN  360
AADAEVEVKM LGTDAMIQVH CVDVNYPCAR LMDTLRGLDF GVTHASVSKV KELILQDVVV  420
TIPNGITSVE SLTTAILTRF QI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-68	bHLH family protein