PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028090665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 256aa MW: 27928.9 Da PI: 6.6801 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66 | 5.3e-21 | 25 | 84 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+++Le+l+++ r+p+ae++++++ +l +++ ++V++WFqN++a++++ XP_028090665.1 25 SRWNPTKEQITILENLYKQgIRTPTAEQIQQITGRLksfgHIEGKNVFYWFQNHKARQRQ 84 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116 | 1.7e-37 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 a++RW+Pt+eQi+iLe+lyk+G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqkq XP_028090665.1 23 ASSRWNPTKEQITILENLYKQGIRTPTAEQIQQITGRLKSFGHIEGKNVFYWFQNHKARQRQKQ 86 689***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 256 aa Download sequence |
MKMEGGSESA VVDVSTSGGA TPASSRWNPT KEQITILENL YKQGIRTPTA EQIQQITGRL 60 KSFGHIEGKN VFYWFQNHKA RQRQKQKQES LAYFNRYLHK ASNVFPPPCP NVVCSPPYYL 120 PQNELGFYPH YPKVLLPGGI KRKPARPDTV ENMKTSGGGV GIESAPLSYN TTDHDGLITG 180 DNNSNSKQET LPLFPLEPTG ILQARTTSSS LASTSAENST ATPSSSSDTT GIEEGGFGDQ 240 PFIDFFSGNN GNYESD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G59340.1 | 2e-50 | WOX family protein |