PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090002.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 291aa    MW: 32743.1 Da    PI: 6.3107
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.7e-1832122199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffk++     + s+ l lp kfa++  ++    +++ +led sg++W+v+l  +k++g+  +++GW  F  ++gL+  Dfv+F+++++s f  vv
  XP_028090002.1  32 FFKIM--IGDNFSKVLFLPPKFARTVsDL---IDQKTQLEDASGQRWTVTL--SKYDGSLAFQQGWPAFSLEHGLEIEDFVLFHYIEQSHF--VV 117
                     67777..334444569*******999544...45689**************..*********************************98999..99 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     +++ k
  XP_028090002.1 118 QIYGK 122
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDCPIPACAK CTLNCLLIHG KNKDPSTVAT SFFKIMIGDN FSKVLFLPPK FARTVSDLID  60
QKTQLEDASG QRWTVTLSKY DGSLAFQQGW PAFSLEHGLE IEDFVLFHYI EQSHFVVQIY  120
GKSGCEKLYF SKENSNQKKR TKANRDSCAK DEQCHTIDNV SINSMNKEGS NTSTVSGSEG  180
EISRRLPMAT TYTTSNIDNV NERLHHVPRT KCIEEPFYMI DRDSGRTSGV DGTKEVLVED  240
VRPLSHVNTM PQSQAEVEIV DKLPVTEEVV RQTTLSDVPN LPILEKIRSF K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.19e-14B3 family protein