PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088844.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 312aa MW: 33571.4 Da PI: 9.4051

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.4	1.3e-38	58	144	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i ++tgt++ +as+ a+ s+s++ ss++ XP_028088844.1 58 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIMAATGTGTMPASALAAAGGSVSQQGSSIS 144 789******************************************************************999666666666655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MDPKGSTKQP QGQEGLPNTN PYYTNMGENK PAEIKDFQIV IAEKEEDSAN KKQLAALAPK 60 RSSNKDRHTK VEGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLQQ AEPSIMAATG 120 TGTMPASALA AAGGSVSQQG SSISAGLQQK IDELGGRATW QTMIGGNLGR THVATAGIWP 180 PPPPPPAVVS GFGFQSSPSS TGPSIANLGS ESSNYLHKIG FPGFDLPNNN MGPMSFTSIL 240 GGSSQHLPGL ELGLSQDGHI GVLNHQALSQ IYQQMGHARM QQQQQQQQQH QHQHQHHQQQ 300 SSKDDSQGER KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	5e-69	TCP family protein