PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088699.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 607aa MW: 67063.2 Da PI: 6.2903

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.8	1.8e-08	525	563	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_028088699.1 525 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 563 5887779******************************88 PP
2	BELL	78.7	7.9e-26	396	465	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 q++++kk +Ll ll+ Vd+rY+q+ ++++tvis+F+a+++l++ ++++++Al+ iS +++Lk++i++qi XP_028088699.1 396 GQDVEAKKKHLLALLQVVDERYNQCLDEIHTVISAFHAATELDP-HLHARFALQSISSLYKNLKERISNQI 465 57899*************************************.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MHFDSSAPHN MTENDAFNVP MDMGDRNAIF MDGMFSHMSS VSPAQPNSLD PNNQNQLMAE 60 FPALPMLQGE CTNNLHTGFT ISNHVGHVGC DALIPGNPSL GRNTITDNSL TSSCPISNTE 120 ALGRFMGGEP ISVASLATLL APRCDPHDNL NELATSAPSV NPLEILKTSI SNDYSNALNS 180 AFATSMNCGY DGILGGVNNK WDFDKCLASP ELSGKVPGRT GFQPFQLMGN INPNGWISLD 240 NVSPDNPSGS SEFRNELSLS LATCQPSIIH GTSIPDQCSE ISCSSVTHRS LNEMPFGSET 300 SCNSKNLSLS FGSCRSVQVS QFLSGSRYLR VIQEILAEIA SYSLENLDQI NYPASGIGTG 360 AKFSFSSSCL AGRGYTVMGS DGDDRFEGQM EPVVQGQDVE AKKKHLLALL QVVDERYNQC 420 LDEIHTVISA FHAATELDPH LHARFALQSI SSLYKNLKER ISNQIITAGM YFNKGDDARE 480 ADKSFETSFI QKQWALQQLR SKDHQLWRPQ RGLPERSVSV LRAWMFQNFL HPYPKDAEKH 540 LLAVKSGLTR SQVSNWFINA RVRLWKPMIE EMYAEMNRRK GRRSDEETDS NHRSLVSIGS 600 HRRFNMK

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MHFDSSAPHN MTENDAFNVP MDMGDRNAIF MDGMFSHMSS VSPAQPNSLD PNNQNQLMAE  60
FPALPMLQGE CTNNLHTGFT ISNHVGHVGC DALIPGNPSL GRNTITDNSL TSSCPISNTE  120
ALGRFMGGEP ISVASLATLL APRCDPHDNL NELATSAPSV NPLEILKTSI SNDYSNALNS  180
AFATSMNCGY DGILGGVNNK WDFDKCLASP ELSGKVPGRT GFQPFQLMGN INPNGWISLD  240
NVSPDNPSGS SEFRNELSLS LATCQPSIIH GTSIPDQCSE ISCSSVTHRS LNEMPFGSET  300
SCNSKNLSLS FGSCRSVQVS QFLSGSRYLR VIQEILAEIA SYSLENLDQI NYPASGIGTG  360
AKFSFSSSCL AGRGYTVMGS DGDDRFEGQM EPVVQGQDVE AKKKHLLALL QVVDERYNQC  420
LDEIHTVISA FHAATELDPH LHARFALQSI SSLYKNLKER ISNQIITAGM YFNKGDDARE  480
ADKSFETSFI QKQWALQQLR SKDHQLWRPQ RGLPERSVSV LRAWMFQNFL HPYPKDAEKH  540
LLAVKSGLTR SQVSNWFINA RVRLWKPMIE EMYAEMNRRK GRRSDEETDS NHRSLVSIGS  600
HRRFNMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-109	TALE family protein