PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 25459.5 Da PI: 5.9895 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.9 | 1.3e-11 | 67 | 116 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + + Er+RR+++N+ + Lr+ lP ++K s ++ e+Av+YIk L+ XP_028088696.1 67 KRSDTERKRRREMNTLCASLRSELPLeY---IKGKRSTSDHIEEAVNYIKTLE 116 66789*********************77...*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MFPFDQNDGS SHQIPCTTHH QQHDINQDLI FSGLDALELE RINNSTTNHL SYDHTSTSVM 60 DKDKKIKRSD TERKRRREMN TLCASLRSEL PLEYIKGKRS TSDHIEEAVN YIKTLEKNIQ 120 ELDHKRDELK KSSNPEDGSS SYFTVGPCLG GVKIVFSCGF DEEKLQLSRV MEFLLEEGLN 180 VVTCVSTKAN DKLLHTIQCE ATDLKCFNHS ELQQKLNNVV TDP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 77 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-38 | bHLH family protein |