PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 26595.8 Da PI: 6.2351 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.3 | 2e-11 | 69 | 120 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + + + +Er+RR+++ + ++ Lr+ lP ++K s ++ e+Av+YIk+L+ XP_028088692.1 69 KINRSDIERKRRREMSTLYASLRSELPLeY---IKGKRSTSDHMEEAVNYIKNLE 120 667789**********************77...*******************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MFPFHQNDDL SQIPCTTHHQ QHGIDQDLIF SGLDSLELER VNNSSATNYL TTTQDSEHTS 60 TGVVDKDKKI NRSDIERKRR REMSTLYASL RSELPLEYIK GKRSTSDHME EAVNYIKNLE 120 KNIQQLRHKR DELKKFSSPD SLYSGDGNSS HFFTVCPCLG GVKIVFSSGF NEEKLQLSRV 180 MEFLLEEGLN VVTCASTKVN DKLIHTIQCE VTDPKCFNDS ELQQKLYNVV TNG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 81 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 4e-40 | bHLH family protein |