PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088645.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 326aa    MW: 36000.4 Da    PI: 4.85
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.81.3e-36301202101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d++++++isw+e+g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll++
  XP_028088645.1  30 FLTKTYQLVDDSTIDDVISWNEDGSTFIVWNPTEFASDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRRGEKRLLCD 115
                     9*****************************************************************99.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_028088645.1 116 IQRRK 120
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAPPPPPPPG EQNGGESMAG DASRSLPTPF LTKTYQLVDD STIDDVISWN EDGSTFIVWN  60
PTEFASDLLP KYFKHNNFSS FVRQLNTYGF RKVVPDRWEF SNECFRRGEK RLLCDIQRRK  120
VPTPATGAAV TVAAVPVTVA GVAAPSNSGE EQVISSNSSP AATPMLCRET SPGTTAELID  180
ENEKLRKENM QLNTELNKMK NLCDNIYALM SNYAINRPEI GSPAENPLDL FPPAKRLSEE  240
PPVGAAGNNQ SKKAEDEARP RLFGVPIGAK RLRECEGEAA EQQKELRLQL GGTEVKSEPL  300
DHMDGGDNQE IVWLRQCQRV NQRVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-94HSF family protein