PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088115.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 511aa MW: 58213.5 Da PI: 5.908

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.3e-18	157	247	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v+ ++ lp kf+++h g++ t++ledesg++++ k+ s + l++GW++F+k ++L egD vvF+l+++ +f + XP_028088115.1 157 FVKLMLRSHVTYCFWMGLPSKFCKSHlpGHD----ETVVLEDESGEEYKTKF--LAVS--HGLSGGWRGFAKVKKLLEGDAVVFHLVRSCKF--K 241 89**********************75444....58***********..5555..55***********************98888..8 PP EEEE-S CS B3 94 vkvfrk 99 v+++r+ XP_028088115.1 242 VHIVRA 247 888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MEKPSSSPNS ISKTCSLSNP SSSSFYVHTD NLPLLREKSN LGNSVSMDDD AQQHNLTFTE 60 THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ETKQVRIVSD DPRKSECRKR 120 KRGIMDDLYD HFEAKSSLVM KRAEEVQASL SPEFPSFVKL MLRSHVTYCF WMGLPSKFCK 180 SHLPGHDETV VLEDESGEEY KTKFLAVSHG LSGGWRGFAK VKKLLEGDAV VFHLVRSCKF 240 KVHIVRANDL AIVDRAPEPV YFDARAEETD FEKNSRTCEK AEENHSRLVP PNILGENPRP 300 VTDQSESETD QSENDTENLY SSDMEGYGLS GSIADFNNFN IIVNGLPIDH TLSQHTRTKY 360 YDLCCTQKSY LHNHLLKSVD TKLAAEIVSK TITIADSIRA SKLSSTSEDD FAIWDKTLEA 420 FEMLGMDVGF LRARLNRLVR IASELTVAAD SKRYDEAKVE RDRVEVEMRS LELRLLELKQ 480 ARSRLDYEME GLNEKVTRYE VMFQGVANGF W

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MEKPSSSPNS ISKTCSLSNP SSSSFYVHTD NLPLLREKSN LGNSVSMDDD AQQHNLTFTE  60
THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ETKQVRIVSD DPRKSECRKR  120
KRGIMDDLYD HFEAKSSLVM KRAEEVQASL SPEFPSFVKL MLRSHVTYCF WMGLPSKFCK  180
SHLPGHDETV VLEDESGEEY KTKFLAVSHG LSGGWRGFAK VKKLLEGDAV VFHLVRSCKF  240
KVHIVRANDL AIVDRAPEPV YFDARAEETD FEKNSRTCEK AEENHSRLVP PNILGENPRP  300
VTDQSESETD QSENDTENLY SSDMEGYGLS GSIADFNNFN IIVNGLPIDH TLSQHTRTKY  360
YDLCCTQKSY LHNHLLKSVD TKLAAEIVSK TITIADSIRA SKLSSTSEDD FAIWDKTLEA  420
FEMLGMDVGF LRARLNRLVR IASELTVAAD SKRYDEAKVE RDRVEVEMRS LELRLLELKQ  480
ARSRLDYEME GLNEKVTRYE VMFQGVANGF W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-38	B3 family protein