PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028088115.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 511aa MW: 58213.5 Da PI: 5.908 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.1 | 3.3e-18 | 157 | 247 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v+ ++ lp kf+++h g++ t++ledesg++++ k+ s + l++GW++F+k ++L egD vvF+l+++ +f + XP_028088115.1 157 FVKLMLRSHVTYCFWMGLPSKFCKSHlpGHD----ETVVLEDESGEEYKTKF--LAVS--HGLSGGWRGFAKVKKLLEGDAVVFHLVRSCKF--K 241 89************************75444....58***************..5555..55*************************98888..8 PP EEEE-S CS B3 94 vkvfrk 99 v+++r+ XP_028088115.1 242 VHIVRA 247 888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence |
MEKPSSSPNS ISKTCSLSNP SSSSFYVHTD NLPLLREKSN LGNSVSMDDD AQQHNLTFTE 60 THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ETKQVRIVSD DPRKSECRKR 120 KRGIMDDLYD HFEAKSSLVM KRAEEVQASL SPEFPSFVKL MLRSHVTYCF WMGLPSKFCK 180 SHLPGHDETV VLEDESGEEY KTKFLAVSHG LSGGWRGFAK VKKLLEGDAV VFHLVRSCKF 240 KVHIVRANDL AIVDRAPEPV YFDARAEETD FEKNSRTCEK AEENHSRLVP PNILGENPRP 300 VTDQSESETD QSENDTENLY SSDMEGYGLS GSIADFNNFN IIVNGLPIDH TLSQHTRTKY 360 YDLCCTQKSY LHNHLLKSVD TKLAAEIVSK TITIADSIRA SKLSSTSEDD FAIWDKTLEA 420 FEMLGMDVGF LRARLNRLVR IASELTVAAD SKRYDEAKVE RDRVEVEMRS LELRLLELKQ 480 ARSRLDYEME GLNEKVTRYE VMFQGVANGF W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 2e-38 | B3 family protein |