PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028088113.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 512aa    MW: 58263.5 Da    PI: 5.7832
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028088113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.3e-18155245199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f+k +++s+v+   ++ lp kf+++h  g++     t++ledesg++++ k+     s  + l++GW++F+k ++L egD vvF+l+++ +f  +
  XP_028088113.1 155 FVKLMLRSHVTYCFWMGLPSKFCKSHlpGHD----ETVVLEDESGEEYKTKF--LAVS--HGLSGGWRGFAKVKKLLEGDAVVFHLVRSCKF--K 239
                     89************************75444....58***************..5555..55*************************98888..8 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v+++r+
  XP_028088113.1 240 VHIVRA 245
                     888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MEKPSSSPNS ISKTCSLSNP SSSSFYVHTD NLPLLREKSN LGNSVSMDDD AQQHNLTFTE  60
THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ETKQIVSDDP RKSECRKRKR  120
GIMDDLYDHF EAKSSLVMKR AEEVQASLSP EFPSFVKLML RSHVTYCFWM GLPSKFCKSH  180
LPGHDETVVL EDESGEEYKT KFLAVSHGLS GGWRGFAKVK KLLEGDAVVF HLVRSCKFKV  240
HIVRANDLAI VDRAPEPVYF DARAEETDFA YAEKNSRTCE KAEENHSRLV PPNILGENPR  300
PVTDQSESET DQSENDTENL YSSDMEGYGL SGSIADFNNF NIIVNGLPID HTLSQHTRTK  360
YYDLCCTQKS YLHNHLLKSV DTKLAAEIVS KTITIADSIR ASKLSSTSED DFAIWDKTLE  420
AFEMLGMDVG FLRARLNRLV RIASELTVAA DSKRYDEAKV ERDRVEVEMR SLELRLLELK  480
QARSRLDYEM EGLNEKVTRY EVMFQGVANG FW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.15e-38B3 family protein